ENSDARG00000069230


Danio rerio

Features
Gene ID: ENSDARG00000069230
  
Biological name :zgc:153738
  
Synonyms : zgc:153738
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 18450052
Gene end: 18460791
  
Corresponding Affymetrix probe sets: Dr.18671.1.A1_at (Zebrafish Array)   Dr.18671.2.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000105398
Ensembl peptide - ENSDARP00000124358
NCBI entrez gene - 558115     See in Manteia.
RefSeq - NM_001079968
RefSeq Peptide - NP_001073437
swissprot - F8W3M4
swissprot - A5PF14
ZFIN ID - ZDB-GENE-061013-622
Ensembl - ENSDARG00000069230
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
iqca1 / IQ motif containing with AAA domain 1 / Iqca* / Q86XH1* / Q9CUL5* / IQ and AAA domain-containing protein 1 *ENSDARG0000005727648
fign / fidgetin / Q5HY92* / fidgetin, microtubule severing factor*ENSDARG0000000866210
fignl1 / fidgetin-like 1 / Q6PIW4* / Q8BPY9* / Fidgetin-like protein 1 *ENSDARG000000164276
si:dkey-157g16.6 / A6NMB9* / FIGNL2* / fidgetin like 2*ENSDARG000000570625
spast / Q6NW58 / spastin / Q9QYY8* / Q9UBP0*ENSDARG000000249334


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr