ENSDARG00000016427


Danio rerio

Features
Gene ID: ENSDARG00000016427
  
Biological name :fignl1
  
Synonyms : fidgetin-like 1 / fignl1
  
Possible biological names infered from orthology : Fidgetin-like protein 1 / Q6PIW4 / Q8BPY9
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 15933168
Gene end: 15943904
  
Corresponding Affymetrix probe sets: Dr.10794.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117905
Ensembl peptide - ENSDARP00000017944
NCBI entrez gene - 569539     See in Manteia.
RefSeq - NM_001128751
RefSeq - XM_005156683
RefSeq - XM_005156684
RefSeq Peptide - NP_001122223
swissprot - B3DGU1
ZFIN ID - ZDB-GENE-030131-1862
Ensembl - ENSDARG00000016427
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000026363Gallus gallus
 FIGNL1ENSG00000132436Homo sapiens
 Fignl1ENSMUSG00000035455Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fign / fidgetin / Q5HY92* / fidgetin, microtubule severing factor*ENSDARG0000000866236
spast / Q6NW58 / spastin / Q9QYY8* / Q9UBP0*ENSDARG0000002493327
si:dkey-157g16.6 / A6NMB9* / FIGNL2* / fidgetin like 2*ENSDARG000000570625
iqca1 / IQ motif containing with AAA domain 1 / Iqca* / Q86XH1* / Q9CUL5* / IQ and AAA domain-containing protein 1 *ENSDARG000000572764
zgc:153738ENSDARG000000692303


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR015415  Vps4 oligomerisation, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010569 regulation of double-strand break repair via homologous recombination IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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