ENSDARG00000069280


Danio rerio

Features
Gene ID: ENSDARG00000069280
  
Biological name :tsen15
  
Synonyms : tsen15 / TSEN15 tRNA splicing endonuclease subunit
  
Possible biological names infered from orthology : Q8WW01 / tRNA splicing endonuclease subunit 15
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 9946121
Gene end: 9957805
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000091469
NCBI entrez gene - 100005064     See in Manteia.
swissprot - A5WV68
ZFIN ID - ZDB-GENE-041008-211
Ensembl - ENSDARG00000069280
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSEN15ENSGALG00000004782Gallus gallus
 Q8WW01ENSG00000198860Homo sapiens
 Tsen15ENSMUSG00000014980Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006677  tRNA intron endonuclease, catalytic domain-like
 IPR018593  tRNA-splicing endonuclease subunit Sen15


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 biological_processGO:0090501 RNA phosphodiester bond hydrolysis IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0000213 tRNA-intron endonuclease activity IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004518 nuclease activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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