ENSDARG00000069619


Danio rerio

Features
Gene ID: ENSDARG00000069619
  
Biological name :atf7ip
  
Synonyms : A0JME2 / activating transcription factor 7 interacting protein / atf7ip
  
Possible biological names infered from orthology : Activating transcription factor 7-interacting protein 1 / activating transcription factor 7 interacting protein 2 / ATF7IP2 / Q3UL97 / Q5U623 / Q6VMQ6 / Q7TT18
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 45570059
Gene end: 45616470
  
Corresponding Affymetrix probe sets: Dr.433.1.A1_at (Zebrafish Array)   Dr.433.2.S1_at (Zebrafish Array)   Dr.433.2.S1_a_at (Zebrafish Array)   Dr.433.3.S1_at (Zebrafish Array)   NM_001077603_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000124715
Ensembl peptide - ENSDARP00000136294
Ensembl peptide - ENSDARP00000122892
Ensembl peptide - ENSDARP00000123864
Ensembl peptide - ENSDARP00000124277
Ensembl peptide - ENSDARP00000125013
Ensembl peptide - ENSDARP00000124632
NCBI entrez gene - 558977     See in Manteia.
RefSeq - XM_005160041
RefSeq - XM_005160044
RefSeq - XM_005160045
RefSeq - XM_005160048
RefSeq - XM_021475019
RefSeq - XM_021475024
RefSeq - XM_021475032
RefSeq - NM_001077603
RefSeq - XM_005160043
RefSeq Peptide - NP_001071071
swissprot - F8W4P6
swissprot - A0A0R4IKD6
swissprot - A0JME2
swissprot - F8W2I7
swissprot - F8W2R7
swissprot - F8W418
swissprot - F8W5Q4
ZFIN ID - ZDB-GENE-061103-178
Ensembl - ENSDARG00000069619
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATF7IPENSGALG00000011814Gallus gallus
 ATF7IPENSG00000171681Homo sapiens
 Q5U623ENSG00000166669Homo sapiens
 Atf7ipENSMUSG00000030213Mus musculus
 Q3UL97ENSMUSG00000039200Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atf7ip2 / activating transcription factor 7 interacting protein 2ENSDARG000000896989


Protein motifs (from Interpro)
Interpro ID Name
 IPR003961  Fibronectin type III
 IPR013783  Immunoglobulin-like fold
 IPR026085  Activating transcription factor 7-interacting protein
 IPR031870  ATF7-interacting protein , protein binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
PKMTs methylate histone lysines


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000099021 setdb1b / SET domain, bifurcated 1b / Q15047* / SETDB1* / SET domain bifurcated 1*  / complex / reaction






 

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