ENSDARG00000069833


Danio rerio

Features
Gene ID: ENSDARG00000069833
  
Biological name :rhbdl2
  
Synonyms : rhbdl2 / rhomboid, veinlet-like 2 (Drosophila)
  
Possible biological names infered from orthology : A2AGA4 / Q9NX52 / rhomboid like 2 / Rhomboid-related protein 2 Rhomboid-related protein 2, N-terminal fragment Rhomboid-related protein 2, C-terminal fragment
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 33142734
Gene end: 33154518
  
Corresponding Affymetrix probe sets: Dr.24194.1.S1_at (Zebrafish Array)   NM_201204_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000143286
Ensembl peptide - ENSDARP00000147452
Ensembl peptide - ENSDARP00000058470
Ensembl peptide - ENSDARP00000092728
Ensembl peptide - ENSDARP00000123618
NCBI entrez gene - 792002     See in Manteia.
RefSeq - NM_201204
RefSeq Peptide - NP_957498
swissprot - E7F4U4
swissprot - F1QAX9
ZFIN ID - ZDB-GENE-040426-732
Ensembl - ENSDARG00000069833
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9NX52ENSG00000158315Homo sapiens
 A2AGA4ENSMUSG00000043333Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rhbdl3 / rhomboid, veinlet-like 3 (Drosophila) / P58873* / P58872* / rhomboid like 3* / Rhomboid-related protein 3 *ENSDARG0000010519035
rhbdl1 / rhomboid, veinlet-like 1 (Drosophila) / O75783* / rhomboid like 1*ENSDARG0000008704034


Protein motifs (from Interpro)
Interpro ID Name
 IPR002610  Peptidase S54, rhomboid
 IPR017213  Peptidase S54, rhomboid, metazoan
 IPR022764  Peptidase S54, rhomboid domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0016485 protein processing IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0004252 serine-type endopeptidase activity IBA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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