ENSDARG00000069922


Danio rerio

Features
Gene ID: ENSDARG00000069922
  
Biological name :pla1a
  
Synonyms : phospholipase A1 member A / pla1a / popdc2 / Q6JWV8
  
Possible biological names infered from orthology : popeye domain containing 2 / Popeye domain-containing protein 2 / Q9ES82 / Q9HBU9
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 21222428
Gene end: 21231297
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000136769
Ensembl peptide - ENSDARP00000092923
Ensembl peptide - ENSDARP00000125097
NCBI entrez gene - 793666     See in Manteia.
RefSeq - NM_001020800
RefSeq - NM_001114450
RefSeq Peptide - NP_001107922
RefSeq Peptide - NP_001018636
swissprot - F8W5H2
swissprot - A0A0R4IL84
swissprot - Q6JWV8
ZFIN ID - ZDB-GENE-030131-5949
ZFIN ID - ZDB-GENE-060518-2
Ensembl - ENSDARG00000069922
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POPDC2ENSGALG00000014988Gallus gallus
 POPDC2ENSG00000121577Homo sapiens
 Popdc2ENSMUSG00000022803Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
popdc3 / popeye domain containing 3 / Q9ES81* / Q9HBV1* / Popeye domain-containing protein 3 *ENSDARG0000005855134
bves / Q5PQZ7 / blood vessel epicardial substance / Q8NE79* / Q9ES83*ENSDARG0000005854825


Protein motifs (from Interpro)
Interpro ID Name
 IPR006916  Popeye protein
 IPR014710  RmlC-like jelly roll fold
 IPR018490  Cyclic nucleotide-binding-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping IMP
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0051146 striated muscle cell differentiation IMP
 biological_processGO:0061337 cardiac conduction IMP
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0042383 sarcolemma IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0030552 cAMP binding IEA
 molecular_functionGO:0052689 carboxylic ester hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000114 heart heart malformed , abnormal
heart electrical conductivity , abnormal
Show

 ZFA:0000207 fin musculature fin musculature disorganized , abnormal
Show

 ZFA:0000328 cephalic musculature cephalic musculature hypoplastic , abnormal
cephalic musculature malformed , abnormal
Show

 ZFA:0000471 atrium atrium orientation cardiac ventricle , abnormal
Show

 ZFA:0000473 trunk musculature trunk musculature disorganized , abnormal
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 ZFA:0001056 myotome myotome U-shaped , abnormal
myotome muscle tendon junction structure , abnormal
myotome muscle tendon junction irregular spatial pattern , abnormal
myotome muscle tendon junction decreased thickness , abnormal
myotome irregular spatial pattern , abnormal
myotome myofibril distributed , abnormal
myotome myofibril decreased amount , abnormal
Show

 ZFA:0001094 whole organism whole organism balance , abnormal
whole organism uncoordinated , abnormal
whole organism circling , abnormal
Show

 ZFA:0009115 skeletal muscle cell skeletal muscle cell disorganized , abnormal
skeletal muscle cell decreased mass , abnormal
Show

 ZFA:0009116 slow muscle cell slow muscle cell disorganized , abnormal
slow muscle cell undulate , abnormal
slow muscle cell misaligned with slow muscle cell , abnormal
Show

 ZFA:0009117 fast muscle cell fast muscle cell disorganized , abnormal
fast muscle cell variant shape , abnormal
Show

 ZFA:0009316 cardiac muscle cell cardiac muscle cell myofibril decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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