ENSDARG00000070055


Danio rerio

Features
Gene ID: ENSDARG00000070055
  
Biological name :arfip1
  
Synonyms : ADP-ribosylation factor interacting protein 1 (arfaptin 1) / arfip1
  
Possible biological names infered from orthology : ADP ribosylation factor interacting protein 1 / Gm37240 / P53367
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 25442699
Gene end: 25486571
  
Corresponding Affymetrix probe sets: Dr.2177.1.A1_at (Zebrafish Array)   Dr.8647.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000093278
Ensembl peptide - ENSDARP00000116340
Ensembl peptide - ENSDARP00000121937
NCBI entrez gene - 100003895     See in Manteia.
RefSeq - NM_213368
RefSeq Peptide - NP_998533
swissprot - F1Q8M3
swissprot - E9QBT3
swissprot - Q7SYK6
ZFIN ID - ZDB-GENE-040426-2690
Ensembl - ENSDARG00000070055
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARFIP1ENSGALG00000041361Gallus gallus
 ARFIP1ENSG00000164144Homo sapiens
 Arfip1ENSMUSG00000074513Mus musculus
 Gm37240ENSMUSG00000102805Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
arfip2b / ADP-ribosylation factor interacting protein 2b / Q8K221* / ARFIP2* / P53365* / Arfaptin-2 * / ADP ribosylation factor interacting protein 2*ENSDARG0000005666455
arfip2a / ADP-ribosylation factor interacting protein 2a / Q8K221* / ARFIP2* / P53365* / Arfaptin-2 * / ADP ribosylation factor interacting protein 2*ENSDARG0000005924454


Protein motifs (from Interpro)
Interpro ID Name
 IPR010504  Arfaptin homology (AH) domain
 IPR027267  AH/BAR domain superfamily
 IPR030793  Arfaptin-1
 IPR030798  Arfaptin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034315 regulation of Arp2/3 complex-mediated actin nucleation IBA
 biological_processGO:0050708 regulation of protein secretion IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0032588 trans-Golgi network membrane IEA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0070273 phosphatidylinositol-4-phosphate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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