ENSDARG00000059244


Danio rerio

Features
Gene ID: ENSDARG00000059244
  
Biological name :arfip2a
  
Synonyms : ADP-ribosylation factor interacting protein 2a / arfip2a
  
Possible biological names infered from orthology : ADP ribosylation factor interacting protein 2 / Arfaptin-2 / ARFIP2 / P53365 / Q8K221
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 32249062
Gene end: 32267153
  
Corresponding Affymetrix probe sets: Dr.5865.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000076751
Ensembl peptide - ENSDARP00000123682
Ensembl peptide - ENSDARP00000126739
Ensembl peptide - ENSDARP00000126869
Ensembl peptide - ENSDARP00000126912
NCBI entrez gene - 449664     See in Manteia.
RefSeq - NM_001005935
RefSeq Peptide - NP_001005935
swissprot - Q5XIZ7
swissprot - F1QJ24
swissprot - R4GEF6
swissprot - R4GEJ9
swissprot - R4GE26
ZFIN ID - ZDB-GENE-041010-221
Ensembl - ENSDARG00000059244
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARFIP2ENSGALG00000037839Gallus gallus
 ARFIP2ENSG00000132254Homo sapiens
 Arfip2ENSMUSG00000030881Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
arfip2b / ADP-ribosylation factor interacting protein 2b / Q8K221* / ARFIP2* / P53365* / Arfaptin-2 * / ADP ribosylation factor interacting protein 2*ENSDARG0000005666475
arfip1 / ADP-ribosylation factor interacting protein 1 (arfaptin 1) / P53367* / Gm37240* / ADP ribosylation factor interacting protein 1*ENSDARG0000007005547


Protein motifs (from Interpro)
Interpro ID Name
 IPR010504  Arfaptin homology (AH) domain
 IPR027267  AH/BAR domain superfamily
 IPR030798  Arfaptin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031529 ruffle organization IBA
 biological_processGO:0034315 regulation of Arp2/3 complex-mediated actin nucleation IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0019904 protein domain specific binding IEA


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr