ENSDARG00000070991


Danio rerio

Features
Gene ID: ENSDARG00000070991
  
Biological name :mlpha
  
Synonyms : melanophilin a / mlpha
  
Possible biological names infered from orthology : melanophilin / MLPH / Q9BV36
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 15604759
Gene end: 15641686
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119343
Ensembl peptide - ENSDARP00000145960
Ensembl peptide - ENSDARP00000107521
NCBI entrez gene - 561905     See in Manteia.
RefSeq - NM_001079679
RefSeq Peptide - NP_001073147
swissprot - E7F2P6
swissprot - Q05AI5
ZFIN ID - ZDB-GENE-050208-724
Ensembl - ENSDARG00000070991
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MLPHENSGALG00000003904Gallus gallus
 MLPHENSG00000115648Homo sapiens
 MlphENSMUSG00000026303Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mlphb / melanophilin b / MLPH* / Q9BV36* / melanophilin*ENSDARG0000006248140
myrip / myosin VIIA and Rab interacting protein / MOBP* / Q13875* / Q8NFW9* / Q9D2P8* / Q8K3I4* / Rab effector MyRIP * / myelin-associated oligodendrocyte basic protein*ENSDARG0000003881426
si:ch211-106h4.9 / MOBP* / MYRIP* / Q8K3I4* / Q13875* / Q8NFW9* / Q9D2P8* / Rab effector MyRIP * / myosin VIIA and Rab interacting protein* / myelin-associated oligodendrocyte basic protein*ENSDARG0000007570625


Protein motifs (from Interpro)
Interpro ID Name
 IPR006788  Rab effector MyRIP/Melanophilin
 IPR010911  Rab-binding domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0030050 vesicle transport along actin filament IBA
 biological_processGO:0051876 pigment granule dispersal IMP
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005623 cell IEA
 cellular_componentGO:0030864 cortical actin cytoskeleton IBA
 molecular_functionGO:0003779 actin binding IBA
 molecular_functionGO:0017022 myosin binding IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009091 melanocyte melanocyte melanosome aggregated , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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