ENSDARG00000038814


Danio rerio

Features
Gene ID: ENSDARG00000038814
  
Biological name :myrip
  
Synonyms : myosin VIIA and Rab interacting protein / myrip
  
Possible biological names infered from orthology : MOBP / myelin-associated oligodendrocyte basic protein / Q13875 / Q8K3I4 / Q8NFW9 / Q9D2P8 / Rab effector MyRIP
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 11112113
Gene end: 11325849
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000122281
Ensembl peptide - ENSDARP00000149872
Ensembl peptide - ENSDARP00000112967
NCBI entrez gene - 567049     See in Manteia.
RefSeq - NM_001353925
RefSeq Peptide - NP_001340854
swissprot - E9QHE7
swissprot - F1RCN5
ZFIN ID - ZDB-GENE-080123-1
Ensembl - ENSDARG00000038814
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000041372Gallus gallus
 ENSGALG00000030855Gallus gallus
 MOBPENSG00000168314Homo sapiens
 MYRIPENSG00000170011Homo sapiens
 MobpENSMUSG00000032517Mus musculus
 MyripENSMUSG00000041794Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-106h4.9 / MOBP* / MYRIP* / Q8K3I4* / Q13875* / Q8NFW9* / Q9D2P8* / Rab effector MyRIP * / myosin VIIA and Rab interacting protein* / myelin-associated oligodendrocyte basic protein*ENSDARG0000007570633
mlpha / melanophilin a / MLPH* / Q9BV36* / melanophilin*ENSDARG0000007099112
mlphb / melanophilin b / MLPH* / Q9BV36* / melanophilin*ENSDARG0000006248111


Protein motifs (from Interpro)
Interpro ID Name
 IPR006788  Rab effector MyRIP/Melanophilin
 IPR010911  Rab-binding domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr