ENSDARG00000071233


Danio rerio

Features
Gene ID: ENSDARG00000071233
  
Biological name :zgc:158254
  
Synonyms : zgc:158254
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 6752828
Gene end: 6789033
  
Corresponding Affymetrix probe sets: Dr.9582.1.A1_at (Zebrafish Array)   NM_001080691_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000095950
NCBI entrez gene - 791209     See in Manteia.
RefSeq - NM_001080691
RefSeq Peptide - NP_001074160
swissprot - F1Q9H1
ZFIN ID - ZDB-GENE-070112-2222
Ensembl - ENSDARG00000071233
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
p4htm / prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) / Q8BG58* / Q9NXG6* / prolyl 4-hydroxylase, transmembrane*ENSDARG0000007520953


Protein motifs (from Interpro)
Interpro ID Name
 IPR005123  Oxoglutarate/iron-dependent dioxygenase
 IPR006620  Prolyl 4-hydroxylase, alpha subunit
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
 molecular_functionGO:0031418 L-ascorbic acid binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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