ENSDARG00000074356


Danio rerio

Features
Gene ID: ENSDARG00000074356
  
Biological name :fxn
  
Synonyms : frataxin / fxn
  
Possible biological names infered from orthology : Frataxin, mitochondrial Frataxin intermediate form Frataxin mature form / O35943 / Q16595
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 11325310
Gene end: 11339607
  
Corresponding Affymetrix probe sets: Dr.2525.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000115873
NCBI entrez gene - 556389     See in Manteia.
RefSeq - NM_001083016
RefSeq Peptide - NP_001076485
swissprot - B0V2S4
ZFIN ID - ZDB-GENE-070209-286
Ensembl - ENSDARG00000074356
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FXNENSGALG00000015108Gallus gallus
 FXNENSG00000165060Homo sapiens
 FxnENSMUSG00000059363Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002908  Frataxin/CyaY
 IPR017789  Frataxin
 IPR020895  Frataxin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006879 cellular iron ion homeostasis IBA
 biological_processGO:0007005 mitochondrion organization IBA
 biological_processGO:0016226 iron-sulfur cluster assembly IEA
 biological_processGO:0018283 iron incorporation into metallo-sulfur cluster IBA
 biological_processGO:0034599 cellular response to oxidative stress IBA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0004322 ferroxidase activity IBA
 molecular_functionGO:0008198 ferrous iron binding IBA
 molecular_functionGO:0008199 ferric iron binding IBA
 molecular_functionGO:0034986 iron chaperone activity IBA
 molecular_functionGO:0051537 2 iron, 2 sulfur cluster binding IBA


Pathways (from Reactome)
Pathway description
Mitochondrial protein import
Mitochondrial iron-sulfur cluster biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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