ENSDARG00000074565


Danio rerio

Features
Gene ID: ENSDARG00000074565
  
Biological name :pusl1
  
Synonyms : pseudouridylate synthase-like 1 / pusl1
  
Possible biological names infered from orthology : A2ADA5 / Q8N0Z8 / tRNA pseudouridine synthase-like 1
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 3499111
Gene end: 3525259
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102458
Ensembl peptide - ENSDARP00000137938
Ensembl peptide - ENSDARP00000137758
Ensembl peptide - ENSDARP00000132620
NCBI entrez gene - 555828     See in Manteia.
swissprot - A0A0R4ISL9
swissprot - A0A0R4IP56
swissprot - A0A0R4IEE3
swissprot - F1QJL2
ZFIN ID - ZDB-GENE-101110-1
Ensembl - ENSDARG00000074565
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PUSL1ENSGALG00000001714Gallus gallus
 PUSL1ENSG00000169972Homo sapiens
 Pusl1ENSMUSG00000051557Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001406  Pseudouridine synthase I, TruA
 IPR020095  Pseudouridine synthase I, TruA, C-terminal
 IPR020097  Pseudouridine synthase I, TruA, alpha/beta domain
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031119 tRNA pseudouridine synthesis IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IBA
 molecular_functionGO:0016853 isomerase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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