ENSG00000169972


Homo sapiens

Features
Gene ID: ENSG00000169972
  
Biological name :PUSL1
  
Synonyms : pseudouridylate synthase-like 1 / PUSL1 / Q8N0Z8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p36.33
Gene start: 1308567
Gene end: 1311677
  
Corresponding Affymetrix probe sets: 228733_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000368318
Ensembl peptide - ENSP00000462968
NCBI entrez gene - 126789     See in Manteia.
RefSeq - XM_005244720
RefSeq - NM_153339
RefSeq Peptide - NP_699170
swissprot - Q8N0Z8
swissprot - J3KTG4
Ensembl - ENSG00000169972
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pusl1ENSDARG00000074565Danio rerio
 PUSL1ENSGALG00000001714Gallus gallus
 Pusl1ENSMUSG00000051557Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001406  Pseudouridine synthase I, TruA
 IPR020095  Pseudouridine synthase I, TruA, C-terminal
 IPR020097  Pseudouridine synthase I, TruA, alpha/beta domain
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031119 tRNA pseudouridine synthesis IBA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IEA
 molecular_functionGO:0016853 isomerase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr