ENSDARG00000074860


Danio rerio

Features
Gene ID: ENSDARG00000074860
  
Biological name :slc5a7a
  
Synonyms : slc5a7a / solute carrier family 5 (sodium/choline cotransporter), member 7a
  
Possible biological names infered from orthology : High affinity choline transporter 1 / Q8BGY9 / Q9GZV3 / SLC5A7 / solute carrier family 5 member 7
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 34243650
Gene end: 34261993
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000117033
NCBI entrez gene - 100005589     See in Manteia.
swissprot - F1Q620
ZFIN ID - ZDB-GENE-090313-273
Ensembl - ENSDARG00000074860
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC5A7ENSGALG00000016804Gallus gallus
 Q9GZV3ENSG00000115665Homo sapiens
 Q8BGY9ENSMUSG00000023945Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FQ377903.2 / Q9GZV3* / SLC5A7* / solute carrier family 5 member 7*ENSDARG0000010233667


Protein motifs (from Interpro)
Interpro ID Name
 IPR001734  Sodium/solute symporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008292 acetylcholine biosynthetic process IBA
 biological_processGO:0015871 choline transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005307 choline:sodium symporter activity IBA
 molecular_functionGO:0022857 transmembrane transporter activity IEA
 molecular_functionGO:0033265 choline binding IBA


Pathways (from Reactome)
Pathway description
Acetylcholine Neurotransmitter Release Cycle
Transport of bile salts and organic acids, metal ions and amine compounds


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr