ENSDARG00000075072


Danio rerio

Features
Gene ID: ENSDARG00000075072
  
Biological name :rpap1
  
Synonyms : RNA polymerase II associated protein 1 / rpap1
  
Possible biological names infered from orthology : Q80TE0 / Q9BWH6
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 31535764
Gene end: 31579733
  
Corresponding Affymetrix probe sets: Dr.9689.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000156664
Ensembl peptide - ENSDARP00000100448
NCBI entrez gene - 570666     See in Manteia.
RefSeq - XM_003200358
RefSeq - XM_021473203
swissprot - E7FGQ5
ZFIN ID - ZDB-GENE-090914-1
Ensembl - ENSDARG00000075072
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPAP1ENSGALG00000008624Gallus gallus
 RPAP1ENSG00000103932Homo sapiens
 Rpap1ENSMUSG00000034032Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR013929  RNA polymerase II-associated protein 1, C-terminal
 IPR013930  RNA polymerase II-associated protein 1, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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