ENSMUSG00000034032


Mus musculus

Features
Gene ID: ENSMUSG00000034032
  
Biological name :Rpap1
  
Synonyms : Q80TE0 / RNA polymerase II-associated protein 1 / Rpap1
  
Possible biological names infered from orthology : Q9BWH6
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: E5
Gene start: 119763304
Gene end: 119787537
  
Corresponding Affymetrix probe sets: 10486292 (MoGene1.0st)   1426890_a_at (Mouse Genome 430 2.0 Array)   1426891_at (Mouse Genome 430 2.0 Array)   1440986_at (Mouse Genome 430 2.0 Array)   1443484_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000106420
Ensembl peptide - ENSMUSP00000097127
Ensembl peptide - ENSMUSP00000138619
Ensembl peptide - ENSMUSP00000138873
Ensembl peptide - ENSMUSP00000037275
NCBI entrez gene - 68925     See in Manteia.
MGI - MGI:1916175
RefSeq - XM_011239759
RefSeq - NM_001163701
RefSeq - NM_177294
RefSeq - XM_006500121
RefSeq Peptide - NP_001157173
RefSeq Peptide - NP_796268
swissprot - Q80TE0
swissprot - S4R2F2
swissprot - V9GWX3
Ensembl - ENSMUSG00000034032
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpap1ENSDARG00000075072Danio rerio
 RPAP1ENSGALG00000008624Gallus gallus
 RPAP1ENSG00000103932Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013929  RNA polymerase II-associated protein 1, C-terminal
 IPR013930  RNA polymerase II-associated protein 1, N-terminal
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0030880 RNA polymerase complex ISO
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003899 DNA-directed 5"-3" RNA polymerase activity IEA
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr