ENSDARG00000075530


Danio rerio

Features
Gene ID: ENSDARG00000075530
  
Biological name :pigu
  
Synonyms : phosphatidylinositol glycan anchor biosynthesis, class U / pigu
  
Possible biological names infered from orthology : Q8K358 / Q9H490
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 50713800
Gene end: 50730749
  
Corresponding Affymetrix probe sets: Dr.17985.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000100232
Ensembl peptide - ENSDARP00000129779
NCBI entrez gene - 560242     See in Manteia.
RefSeq - NM_001184955
RefSeq Peptide - NP_001171884
swissprot - F1RES7
swissprot - X1WHR5
ZFIN ID - ZDB-GENE-100629-1
Ensembl - ENSDARG00000075530
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PIGUENSGALG00000001219Gallus gallus
 PIGUENSG00000101464Homo sapiens
 PiguENSMUSG00000038383Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009600  GPI transamidase subunit PIG-U


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016255 attachment of GPI anchor to protein IEA
 biological_processGO:0034394 protein localization to cell surface IMP
 biological_processGO:0050976 detection of mechanical stimulus involved in sensory perception of touch IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0042765 GPI-anchor transamidase complex IEA
 molecular_functionGO:0003923 GPI-anchor transamidase activity IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009150 Rohon-Beard neuron Rohon-Beard neuron increased amount , abnormal
Rohon-Beard neuron alive , abnormal
Rohon-Beard neuron increased age , abnormal
Rohon-Beard neuron decreased functionality , abnormal
Rohon-Beard neuron voltage-gated sodium channel complex mislocalised , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr