ENSDARG00000076169


Danio rerio

Features
Gene ID: ENSDARG00000076169
  
Biological name :pold3
  
Synonyms : pold3 / polymerase (DNA-directed), delta 3, accessory subunit
  
Possible biological names infered from orthology : DNA polymerase delta 3, accessory subunit / Q15054
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 21743599
Gene end: 21754630
  
Corresponding Affymetrix probe sets: Dr.25641.1.A1_at (Zebrafish Array)   NM_001042769_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000092475
NCBI entrez gene - 692256     See in Manteia.
RefSeq - NM_001042769
RefSeq Peptide - NP_001036234
swissprot - F1Q825
ZFIN ID - ZDB-GENE-060512-59
Ensembl - ENSDARG00000076169
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POLD3ENSGALG00000017307Gallus gallus
 POLD3ENSG00000077514Homo sapiens
 Pold3ENSMUSG00000030726Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019038  DNA polymerase subunit Cdc27


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication IEA
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
Recognition of DNA damage by PCNA-containing replication complex
Polymerase switching on the C-strand of the telomere
Processive synthesis on the C-strand of the telomere
Telomere C-strand (Lagging Strand) Synthesis
Removal of the Flap Intermediate from the C-strand
Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)
Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)
PCNA-Dependent Long Patch Base Excision Repair
Termination of translesion DNA synthesis
HDR through Homologous Recombination (HRR)
Gap-filling DNA repair synthesis and ligation in GG-NER
Dual Incision in GG-NER
Dual incision in TC-NER
Gap-filling DNA repair synthesis and ligation in TC-NER
Polymerase switching
Removal of the Flap Intermediate
Processive synthesis on the lagging strand


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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