ENSDARG00000077299


Danio rerio

Features
Gene ID: ENSDARG00000077299
  
Biological name :yars2
  
Synonyms : tyrosyl-tRNA synthetase 2, mitochondrial / yars2
  
Possible biological names infered from orthology : Q8BYL4 / Q9Y2Z4 / tyrosyl-tRNA synthetase 2
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 2263857
Gene end: 2277132
  
Corresponding Affymetrix probe sets: Dr.6127.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000070911
NCBI entrez gene - 556702     See in Manteia.
RefSeq - NM_001143920
RefSeq Peptide - NP_001137392
swissprot - F1Q4R5
ZFIN ID - ZDB-GENE-030131-6268
Ensembl - ENSDARG00000077299
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000012919Gallus gallus
 YARS2ENSG00000139131Homo sapiens
 Yars2ENSMUSG00000022792Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001412  Aminoacyl-tRNA synthetase, class I, conserved site
 IPR002305  Aminoacyl-tRNA synthetase, class Ic
 IPR002307  Tyrosine-tRNA ligase
 IPR002942  RNA-binding S4 domain
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold
 IPR024088  Tyrosine-tRNA ligase, bacterial-type
 IPR024107  Tyrosine-tRNA ligase, bacterial-type, type 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006437 tyrosyl-tRNA aminoacylation IEA
 biological_processGO:0043039 tRNA aminoacylation IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004831 tyrosine-tRNA ligase activity IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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