ENSDARG00000077698


Danio rerio

Features
Gene ID: ENSDARG00000077698
  
Biological name :rsad1
  
Synonyms : radical S-adenosyl methionine domain containing 1 / rsad1
  
Possible biological names infered from orthology : Q5SUV1 / Q9HA92 / Radical S-adenosyl methionine domain-containing protein 1, mitochondrial
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 50155245
Gene end: 50178302
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000117132
Ensembl peptide - ENSDARP00000144801
Ensembl peptide - ENSDARP00000101526
NCBI entrez gene - 565897     See in Manteia.
RefSeq - NM_001083557
RefSeq Peptide - NP_001077026
swissprot - E9QIJ7
swissprot - F1RB14
ZFIN ID - ZDB-GENE-030131-2508
Ensembl - ENSDARG00000077698
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RSAD1ENSG00000136444Homo sapiens
 Rsad1ENSMUSG00000039096Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004559  Oxygen-independent coproporphyrinogen III oxidase-like
 IPR006638  Elp3/MiaB/NifB
 IPR007197  Radical SAM
 IPR010723  HemN, C-terminal
 IPR013785  Aldolase-type TIM barrel
 IPR034505  Anaerobic coproporphyrinogen-III oxidase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006779 porphyrin-containing compound biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004109 coproporphyrinogen oxidase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051536 iron-sulfur cluster binding IEA
 molecular_functionGO:0051539 4 iron, 4 sulfur cluster binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr