ENSDARG00000077950


Danio rerio

Features
Gene ID: ENSDARG00000077950
  
Biological name :tor1
  
Synonyms : tor1 / torsin family 1
  
Possible biological names infered from orthology : O14656 / O14657 / Q9ER39 / Q9ER41 / TOR1A / TOR1B / Torsin-1B / torsin family 1 member A / torsin family 1, member A (torsin A) / torsin family 1 member B
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 3775551
Gene end: 3787325
  
Corresponding Affymetrix probe sets: Dr.9489.1.S1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000103594
Ensembl peptide - ENSDARP00000122316
NCBI entrez gene - 565062     See in Manteia.
RefSeq - NM_001200015
RefSeq - XM_005161523
RefSeq Peptide - NP_001186944
swissprot - E9QHA7
swissprot - E9QG29
ZFIN ID - ZDB-GENE-080917-50
Ensembl - ENSDARG00000077950
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000004180Gallus gallus
 TOR1AENSGALG00000004165Gallus gallus
 TOR1BLENSGALG00000023709Gallus gallus
 TOR1AENSG00000136827Homo sapiens
 TOR1BENSG00000136816Homo sapiens
 Tor1aENSMUSG00000026849Mus musculus
 Tor1bENSMUSG00000026848Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tor1l1 / torsin family 1 like 1 / TOR1B* / TOR1A* / O14657* / O14656* / torsin family 1 member A* / torsin family 1 member B*ENSDARG0000005585647
tor1l2 / torsin family 1 like 2 / TOR1B* / TOR1A* / O14657* / O14656* / torsin family 1 member A* / torsin family 1 member B*ENSDARG0000009074147
tor1l3 / torsin family 1 like 3 / TOR1B* / TOR1A* / O14657* / O14656* / torsin family 1 member A* / torsin family 1 member B*ENSDARG0000002689543
tor3a / torsin family 3, member A / Q9ER38* / Q9H497* / Torsin-3A *ENSDARG0000007930843
tor2a / torsin family 2, member A / Q8R1J9* / Q5JU69* / Q8N2E6* / Torsin-2A *ENSDARG0000010055937
tor4aa / Q568B8 / torsin family 4, member Aa / TOR4A* / Q9NXH8* / torsin family 4 member A*ENSDARG0000001014525
tor4ab / torsin family 4, member Ab / TOR4A* / Q9NXH8* / Q8BH02* / Torsin-4A * / torsin family 4 member A*ENSDARG0000009116920


Protein motifs (from Interpro)
Interpro ID Name
 IPR001270  ClpA/B family
 IPR010448  Torsin
 IPR017378  Torsin 1/2
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030549  Torsin-1A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006998 nuclear envelope organization IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0031175 neuron projection development IEA
 biological_processGO:0045104 intermediate filament cytoskeleton organization IEA
 biological_processGO:0048489 synaptic vesicle transport IEA
 biological_processGO:0051085 chaperone cofactor-dependent protein refolding IEA
 biological_processGO:0061077 chaperone-mediated protein folding IEA
 biological_processGO:0072321 chaperone-mediated protein transport IEA
 cellular_componentGO:0005635 nuclear envelope IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008092 cytoskeletal protein binding IEA
 molecular_functionGO:0051082 unfolded protein binding IEA


Pathways (from Reactome)
Pathway description
Cargo recognition for clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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