ENSG00000136827


Homo sapiens

Features
Gene ID: ENSG00000136827
  
Biological name :TOR1A
  
Synonyms : O14656 / TOR1A / torsin family 1 member A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q34.11
Gene start: 129812944
Gene end: 129824134
  
Corresponding Affymetrix probe sets: 1554849_at (Human Genome U133 Plus 2.0 Array)   202348_s_at (Human Genome U133 Plus 2.0 Array)   202349_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000345719
NCBI entrez gene - 1861     See in Manteia.
OMIM - 605204
RefSeq - NM_000113
RefSeq Peptide - NP_000104
swissprot - O14656
Ensembl - ENSG00000136827
  
Related genetic diseases (OMIM): 128100 - Dystonia-1, torsion, 128100
  605204 - {Dystonia-1, modifier of}
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tor1ENSDARG00000077950Danio rerio
 tor1l1ENSDARG00000055856Danio rerio
 tor1l2ENSDARG00000090741Danio rerio
 tor1l3ENSDARG00000026895Danio rerio
 TOR1AENSGALG00000004165Gallus gallus
 Tor1aENSMUSG00000026849Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TOR1B / O14657 / torsin family 1 member BENSG0000013681667
TOR2A / Q5JU69 / Q8N2E6 / torsin family 2 member AENSG0000016040442
TOR3A / Q9H497 / torsin family 3 member AENSG0000018628339
TOR4A / Q9NXH8 / torsin family 4 member AENSG0000019811323


Protein motifs (from Interpro)
Interpro ID Name
 IPR010448  Torsin
 IPR017378  Torsin 1/2
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030549  Torsin-1A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000338 protein deneddylation IMP
 biological_processGO:0006979 response to oxidative stress IEA
 biological_processGO:0006996 organelle organization IEA
 biological_processGO:0006998 nuclear envelope organization ISS
 biological_processGO:0007155 cell adhesion IMP
 biological_processGO:0031175 neuron projection development IMP
 biological_processGO:0034504 protein localization to nucleus IEA
 biological_processGO:0044319 wound healing, spreading of cells IEA
 biological_processGO:0045104 intermediate filament cytoskeleton organization IMP
 biological_processGO:0048489 synaptic vesicle transport IMP
 biological_processGO:0051085 chaperone cofactor-dependent protein refolding IEA
 biological_processGO:0051260 protein homooligomerization IDA
 biological_processGO:0051584 regulation of dopamine uptake involved in synaptic transmission IDA
 biological_processGO:0061077 chaperone-mediated protein folding IDA
 biological_processGO:0071712 ER-associated misfolded protein catabolic process IEA
 biological_processGO:0071763 nuclear membrane organization IEA
 biological_processGO:0072321 chaperone-mediated protein transport IDA
 biological_processGO:1900244 positive regulation of synaptic vesicle endocytosis IMP
 biological_processGO:2000008 regulation of protein localization to cell surface IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005788 endoplasmic reticulum lumen IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030133 transport vesicle IEA
 cellular_componentGO:0030141 secretory granule IEA
 cellular_componentGO:0030426 growth cone ISS
 cellular_componentGO:0030659 cytoplasmic vesicle membrane ISS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0042406 extrinsic component of endoplasmic reticulum membrane IDA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043005 neuron projection IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008092 cytoskeletal protein binding IPI
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016887 ATPase activity IDA
 molecular_functionGO:0019894 kinesin binding IPI
 molecular_functionGO:0051082 unfolded protein binding TAS
 molecular_functionGO:0051787 misfolded protein binding IEA


Pathways (from Reactome)
Pathway description
Cargo recognition for clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000473 Torticollis 
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 HP:0000643 Blepharospasm "An involuntary recurrent spasm of both eyelids." [HPO:curators]
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0000722 Obsessive-compulsive disorder 
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 HP:0000739 Anxiety 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001276 Hypertonia 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001304 Torsion dystonia 
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001608 Abnormality of the voice "Any abnormality of the voice." [HPO:curators]
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 HP:0002356 Writer s cramp 
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 HP:0002533 Abnormal posturing 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002808 Kyphosis 
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 HP:0003307 Hyperlordosis 
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 HP:0003829 Incomplete penetrance 
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 HP:0010531 Spinal myoclonus "Spinal myoclonus is generally due to a tumor, infection, injury, or degenerative process of the spinal cord, and is characterized by involuntary rhythmic muscle contractions, usually at a rate of more than one per second. Myoclonus occurs synchronously in several muscles and can be increased in severity and frequency by fatigue or stress, but is usually unaffected by sensory stimuli. Spinal myoclonus ceases during sleep or anesthesia." [HPO:curators]
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 HP:0012075 Personality disorder "An abnormality of mental functioning affecting the personality and behavioural tendencies of an individual and characterized by a rigid and unhealthy pattern of thinking and behavior. The definition of a personal disorder implies that the abnormality is not the result of damage or insult to the brain or from another psychiatric disorder." [HPO:probinson]
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 HP:0025269 Panic attack "A sudden episode of intense fear in a situation in which there is no danger or apparent cause. The panic attack is accompanied by symptoms such as palpitations, sweating and chills or hot flushes. There may be a sensation of dyspnea (being out of breath), chest pain, or abdominal distress. Some indiviudals with panic attacks may experience depersonalization, a fear of going crazy, or a fear of dying." []
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 HP:0045084 Limb myoclonus 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000140022 STON2 / Q8WXE9 / stonin 2  / reaction / complex
 ENSG00000136827 TOR1A / O14656 / torsin family 1 member A  / complex






 

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