ENSDARG00000078105


Danio rerio

Features
Gene ID: ENSDARG00000078105
  
Biological name :depdc5
  
Synonyms : depdc5 / DEP domain containing 5
  
Possible biological names infered from orthology : GATOR complex protein DEPDC5 / O75140 / P61460 / Z82190.2
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 17171604
Gene end: 17222083
  
Corresponding Affymetrix probe sets: Dr.3234.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000112930
Ensembl peptide - ENSDARP00000118425
Ensembl peptide - ENSDARP00000115238
Ensembl peptide - ENSDARP00000098526
NCBI entrez gene - 562995     See in Manteia.
swissprot - E9QH20
swissprot - E7EXM8
swissprot - F1QKZ0
swissprot - F1RCR1
ZFIN ID - ZDB-GENE-091204-356
Ensembl - ENSDARG00000078105
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DEPDC5ENSG00000100150Homo sapiens
 Z82190.2ENSG00000285404Homo sapiens
 Depdc5ENSMUSG00000037426Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000591  DEP domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR027244  Vacuolar membrane-associated protein Iml1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010506 regulation of autophagy IBA
 biological_processGO:0032007 negative regulation of TOR signaling IBA
 biological_processGO:0034198 cellular response to amino acid starvation IBA
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005765 lysosomal membrane IBA
 cellular_componentGO:1990130 GATOR1 complex IBA
 molecular_functionGO:0005096 GTPase activator activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr