ENSDARG00000078138


Danio rerio

Features
Gene ID: ENSDARG00000078138
  
Biological name :si:ch211-202h22.8
  
Synonyms : si:ch211-202h22.8
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 54638126
Gene end: 54648766
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000122433
Ensembl peptide - ENSDARP00000117757
NCBI entrez gene - 559550     See in Manteia.
RefSeq - NM_001291935
RefSeq Peptide - NP_001278864
swissprot - B8A4H0
ZFIN ID - ZDB-GENE-090313-78
Ensembl - ENSDARG00000078138
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-202h22.7ENSDARG0000007391247
si:ch211-202h22.9ENSDARG0000007998045
LO018550.2ENSDARG0000011158336
litaf / Q6GMG8 / lipopolysaccharide-induced TNF factor / Q99732* / Q9JLJ0* / Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog *ENSDARG0000010348333
cdip1 / cell death-inducing p53 target 1 / Q9DB75* / Q9H305* / Mus musculus cell death inducing Trp53 target 1 (Cdip1), transcript variant 5, mRNA.*ENSDARG0000007611831
si:ch211-157c3.4 / Gm5767* / AC022167.5* / predicted 5767 *ENSDARG0000008709325
si:dkeyp-75b4.8ENSDARG0000007754223
Q6DGM1 / ubald1a / UBA-like domain containing 1a / Gm5767* / AC022167.5* / predicted 5767 *ENSDARG0000000236220


Protein motifs (from Interpro)
Interpro ID Name
 IPR006629  LPS-induced tumour necrosis factor alpha factor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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