ENSDARG00000078214


Danio rerio

Features
Gene ID: ENSDARG00000078214
  
Biological name :mybbp1a
  
Synonyms : MYB binding protein (P160) 1a / mybbp1a
  
Possible biological names infered from orthology : MYB binding protein 1a / Q7TPV4 / Q9BQG0
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 8712798
Gene end: 8765428
  
Corresponding Affymetrix probe sets: Dr.19951.1.S1_at (Zebrafish Array)   Dr.19951.1.S1_a_at (Zebrafish Array)   Dr.19951.2.S1_at (Zebrafish Array)   Dr.25251.1.A1_at (Zebrafish Array)   NM_001002042_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000133844
NCBI entrez gene - 321277     See in Manteia.
RefSeq - NM_001002042
RefSeq Peptide - NP_001002042
swissprot - A0A0R4IH55
ZFIN ID - ZDB-GENE-030131-9864
Ensembl - ENSDARG00000078214
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYBBP1AENSGALG00000001363Gallus gallus
 Q9BQG0ENSG00000132382Homo sapiens
 Q7TPV4ENSMUSG00000040463Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007015  DNA polymerase V
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0071897 DNA biosynthetic process IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003887 DNA-directed DNA polymerase activity IEA


Pathways (from Reactome)
Pathway description
B-WICH complex positively regulates rRNA expression


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
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 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
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 ZFA:0000029 hindbrain hindbrain quality , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000084 yolk yolk circular , abnormal
yolk grey , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000110 fourth ventricle fourth ventricle distended , abnormal
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 ZFA:0000112 gut gut hypoplastic , abnormal
gut quality , abnormal
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 ZFA:0000114 heart heart quality , abnormal
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 ZFA:0000123 liver liver increased size , abnormal
liver quality , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001115 trunk trunk decreased thickness , abnormal
trunk necrotic , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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