ENSDARG00000078331


Danio rerio

Features
Gene ID: ENSDARG00000078331
  
Biological name :best1
  
Synonyms : best1 / bestrophin 1
  
Possible biological names infered from orthology : O76090 / O88870
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 3069671
Gene end: 3087556
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124671
Ensembl peptide - ENSDARP00000150046
NCBI entrez gene - 560608     See in Manteia.
swissprot - F8W2M9
ZFIN ID - ZDB-GENE-110411-214
Ensembl - ENSDARG00000078331
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BEST1ENSGALG00000007217Gallus gallus
 BEST1ENSG00000167995Homo sapiens
 Best1ENSMUSG00000037418Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
best2 / bestrophin 2 / Q8NFU1*ENSDARG0000007916339
best4 / bestrophin 4 / Q8NFU0*ENSDARG0000007845532


Protein motifs (from Interpro)
Interpro ID Name
 IPR000615  Bestrophin
 IPR021134  Bestrophin/UPF0187
 IPR033041  Bestrophin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0034707 chloride channel complex IEA
 molecular_functionGO:0005254 chloride channel activity IEA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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