ENSDARG00000078415


Danio rerio

Features
Gene ID: ENSDARG00000078415
  
Biological name :lrrc3
  
Synonyms : A8WHP9 / leucine rich repeat containing 3 / lrrc3
  
Possible biological names infered from orthology : Leucine-rich repeat-containing protein 3 / P59034 / Q9BY71
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 42157578
Gene end: 42164744
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000120615
NCBI entrez gene - 100001372     See in Manteia.
RefSeq - NM_001113642
RefSeq Peptide - NP_001107114
swissprot - A8WHP9
ZFIN ID - ZDB-GENE-080327-13
Ensembl - ENSDARG00000078415
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRC3ENSG00000160233Homo sapiens
 Lrrc3ENSMUSG00000051652Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lrrc3ca / leucine rich repeat containing 3CaENSDARG0000007937144
A3KNN3 / lrrc3b / leucine rich repeat containing 3B / Q96PB8*ENSDARG0000006321543
lrrc3cb / leucine rich repeat containing 3Cb / A6NJW4* / LRRC3C* / leucine rich repeat containing 3C*ENSDARG0000007618628
lrrc17 / leucine rich repeat containing 17 / Q8N6Y2* / Q9CXD9* / Leucine-rich repeat-containing protein 17 *ENSDARG0000003796020


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006469 negative regulation of protein kinase activity IBA
 biological_processGO:0019221 cytokine-mediated signaling pathway IBA
 biological_processGO:0046426 negative regulation of JAK-STAT cascade IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004860 protein kinase inhibitor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr