ENSDARG00000078734


Danio rerio

Features
Gene ID: ENSDARG00000078734
  
Biological name :myo1f
  
Synonyms : myo1f / myosin IF
  
Possible biological names infered from orthology : O00160
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 20250484
Gene end: 20291922
  
Corresponding Affymetrix probe sets: Dr.26078.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000116616
NCBI entrez gene - 565345     See in Manteia.
RefSeq - NM_001256671
RefSeq Peptide - NP_001243600
swissprot - B0S6F2
ZFIN ID - ZDB-GENE-081104-506
Ensembl - ENSDARG00000078734
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYO1FENSGALG00000001571Gallus gallus
 MYO1FENSG00000142347Homo sapiens
 Myo1fENSMUSG00000024300Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
myo1eb / myosin IE, bENSDARG0000000913372
myo1ea / myosin IE, a / MYO1E* / Q12965* / E9Q634* / myosin IE* / Unconventional myosin-Ie *ENSDARG0000003617972
myo1cb / myosin Ic, paralog b / MYO1C* / O00159* / Q9WTI7* / myosin IC* / Unconventional myosin-Ic *ENSDARG0000006157935
myo1b / myosin IB / O43795* / P46735*ENSDARG0000002469434
myo1ca / A5PF48 / myosin Ic, paralog a / MYO1C* / Q9WTI7* / O00159* / myosin IC* / Unconventional myosin-Ic *ENSDARG0000002092433
myo1ha / myosin IHa / MYO1H* / Q8N1T3* / Q9D6A1* / myosin IH* / Unconventional myosin-Ih *ENSDARG0000006196832
myo1hb / myosin IHb / MYO1H* / Q8N1T3* / Q9D6A1* / myosin IH* / Unconventional myosin-Ih *ENSDARG0000007860332
MYO1D / si:ch211-94l19.4 / O94832* / Q5SYD0* / myosin ID* / Unconventional myosin-Id *ENSDARG0000003686331
myo15aa / myosin XVAa / Myo15* / MYO15A* / Q9UKN7* / Q9QZZ4* / myosin XVA* / Unconventional myosin-XV *ENSDARG0000007529230
MYO1G / si:dkeyp-92c9.3 / B0I1T2* / Q5SUA5* / myosin IG* / Unconventional myosin-Ig *ENSDARG0000003610430
myo15ab / myosin XVAb / Myo15* / MYO15A* / Q9UKN7* / Q9QZZ4* / myosin XVA* / Unconventional myosin-XV *ENSDARG0000007847428
myo15b / myosin XVBENSDARG000000748526


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR001452  SH3 domain
 IPR001609  Myosin head, motor domain
 IPR010926  Class I myosin tail homology domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR035507  Unconventional myosin-Ie/If, SH3 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 cellular_componentGO:0016459 myosin complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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