ENSDARG00000024694


Danio rerio

Features
Gene ID: ENSDARG00000024694
  
Biological name :myo1b
  
Synonyms : myo1b / myosin IB
  
Possible biological names infered from orthology : O43795 / P46735
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 16127209
Gene end: 16239130
  
Corresponding Affymetrix probe sets: Dr.4817.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000071655
Ensembl peptide - ENSDARP00000118583
Ensembl peptide - ENSDARP00000121299
Ensembl peptide - ENSDARP00000149565
Ensembl peptide - ENSDARP00000118490
NCBI entrez gene - 541515     See in Manteia.
RefSeq - XM_005167949
RefSeq - XM_005167950
RefSeq - XM_005167951
swissprot - F1QMG4
swissprot - B5DDQ9
swissprot - F1R617
swissprot - Q503M0
ZFIN ID - ZDB-GENE-030131-695
Ensembl - ENSDARG00000024694
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYO1BENSGALG00000007712Gallus gallus
 MYO1BENSG00000128641Homo sapiens
 Myo1bENSMUSG00000018417Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
myo1cb / myosin Ic, paralog b / MYO1C* / O00159* / Q9WTI7* / myosin IC* / Unconventional myosin-Ic *ENSDARG0000006157941
myo1ca / A5PF48 / myosin Ic, paralog a / MYO1C* / Q9WTI7* / O00159* / myosin IC* / Unconventional myosin-Ic *ENSDARG0000002092440
myo1hb / myosin IHb / MYO1H* / Q8N1T3* / Q9D6A1* / myosin IH* / Unconventional myosin-Ih *ENSDARG0000007860339
myo1ha / myosin IHa / MYO1H* / Q8N1T3* / Q9D6A1* / myosin IH* / Unconventional myosin-Ih *ENSDARG0000006196839
MYO1G / si:dkeyp-92c9.3 / B0I1T2* / Q5SUA5* / myosin IG* / Unconventional myosin-Ig *ENSDARG0000003610436
MYO1D / si:ch211-94l19.4 / O94832* / Q5SYD0* / myosin ID* / Unconventional myosin-Id *ENSDARG0000003686336
myo1eb / myosin IE, bENSDARG0000000913335
myo1f / myosin IF / O00160*ENSDARG0000007873434
myo1ea / myosin IE, a / MYO1E* / Q12965* / E9Q634* / myosin IE* / Unconventional myosin-Ie *ENSDARG0000003617934
myo15aa / myosin XVAa / Myo15* / MYO15A* / Q9UKN7* / Q9QZZ4* / myosin XVA* / Unconventional myosin-XV *ENSDARG0000007529229
myo15ab / myosin XVAb / Myo15* / MYO15A* / Q9UKN7* / Q9QZZ4* / myosin XVA* / Unconventional myosin-XV *ENSDARG0000007847427
myo15b / myosin XVBENSDARG000000748525


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR001609  Myosin head, motor domain
 IPR010926  Class I myosin tail homology domain
 IPR011993  PH-like domain superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 cellular_componentGO:0016459 myosin complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000004 anterior axial hypoblast anterior axial hypoblast bleb increased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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