ENSMUSG00000018417


Mus musculus

Features
Gene ID: ENSMUSG00000018417
  
Biological name :Myo1b
  
Synonyms : Myo1b / myosin IB / P46735
  
Possible biological names infered from orthology : O43795
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: C1.1
Gene start: 51749765
Gene end: 51916071
  
Corresponding Affymetrix probe sets: 10354432 (MoGene1.0st)   1427450_x_at (Mouse Genome 430 2.0 Array)   1447364_x_at (Mouse Genome 430 2.0 Array)   1448989_a_at (Mouse Genome 430 2.0 Array)   1448990_a_at (Mouse Genome 430 2.0 Array)   1458007_at (Mouse Genome 430 2.0 Array)   1459679_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000114603
Ensembl peptide - ENSMUSP00000040447
Ensembl peptide - ENSMUSP00000110184
Ensembl peptide - ENSMUSP00000110188
Ensembl peptide - ENSMUSP00000018561
NCBI entrez gene - 17912     See in Manteia.
MGI - MGI:107752
RefSeq - XM_017319213
RefSeq - NM_001161817
RefSeq - NM_001290982
RefSeq - NM_010863
RefSeq - XM_006495764
RefSeq - XM_006495765
RefSeq - XM_006495766
RefSeq - XM_006495767
RefSeq - XM_006495769
RefSeq Peptide - NP_001155289
RefSeq Peptide - NP_001277911
RefSeq Peptide - NP_034993
swissprot - Q7TQD7
swissprot - E9QNH6
swissprot - D3YV80
swissprot - E9Q580
swissprot - P46735
Ensembl - ENSMUSG00000018417
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 myo1bENSDARG00000024694Danio rerio
 MYO1BENSGALG00000007712Gallus gallus
 MYO1BENSG00000128641Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Myo1a / O88329 / Unconventional myosin-Ia / Q9UBC5* / myosin IA*ENSMUSG0000002540154
Myo1c / Q9WTI7 / Unconventional myosin-Ic / O00159* / myosin IC*ENSMUSG0000001777440
Myo1h / Q9D6A1 / Unconventional myosin-Ih / Q8N1T3* / myosin IH*ENSMUSG0000006695237
Myo1d / Q5SYD0 / Unconventional myosin-Id / O94832* / myosin ID*ENSMUSG0000003544136
Myo1e / E9Q634 / Unconventional myosin-Ie / Q12965* / myosin IE*ENSMUSG0000003222034
Myo1g / Q5SUA5 / Unconventional myosin-Ig / B0I1T2* / myosin IG*ENSMUSG0000002043733
Myo1f / myosin IF / O00160*ENSMUSG0000002430033
Myo15 / Q9QZZ4 / Unconventional myosin-XV / MYO15A* / Q9UKN7* / myosin XVA*ENSMUSG0000004267828
Myo15b / myosin XVBENSMUSG0000003442724


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR001609  Myosin head, motor domain
 IPR010926  Class I myosin tail homology domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036072  Class I myosin, motor domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006892 post-Golgi vesicle-mediated transport IEA
 biological_processGO:0007015 actin filament organization IEA
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0030048 actin filament-based movement IEA
 biological_processGO:0033572 transferrin transport IDA
 biological_processGO:0051017 actin filament bundle assembly IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005884 actin filament IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005903 brush border IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0016459 myosin complex IEA
 cellular_componentGO:0030175 filopodium IEA
 cellular_componentGO:0032588 trans-Golgi network membrane IEA
 cellular_componentGO:0045177 apical part of cell IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0071944 cell periphery IEA
 molecular_functionGO:0000146 microfilament motor activity IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005516 calmodulin binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEA
 molecular_functionGO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0030898 actin-dependent ATPase activity IEA
 molecular_functionGO:0045296 cadherin binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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