ENSDARG00000079110


Danio rerio

Features
Gene ID: ENSDARG00000079110
  
Biological name :cluap1
  
Synonyms : cluap1 / clusterin associated protein 1
  
Possible biological names infered from orthology : Gm20695 / Q8R3P7 / Q96AJ1
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 37466770
Gene end: 37484123
  
Corresponding Affymetrix probe sets: Dr.5944.1.S1_at (Zebrafish Array)   NM_213008_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000119132
Ensembl peptide - ENSDARP00000101015
NCBI entrez gene - 406281     See in Manteia.
RefSeq - NM_213008
RefSeq Peptide - NP_998173
swissprot - F1RA40
swissprot - F1R2C8
ZFIN ID - ZDB-GENE-040426-1943
Ensembl - ENSDARG00000079110
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLUAP1ENSGALG00000030877Gallus gallus
 CLUAP1ENSG00000103351Homo sapiens
 Cluap1ENSMUSG00000014232Mus musculus
 Gm20695ENSMUSG00000093575Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019366  Clusterin-associated protein-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Intraflagellar transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle cilium decreased length , abnormal
Kupffers vesicle cilium decreased amount , abnormal
Show

 ZFA:0000003 adaxial cell adaxial cell physical object quality , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000075 spinal cord spinal cord curved , abnormal
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 ZFA:0000076 swim bladder swim bladder uninflated , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000130 olfactory pit olfactory pit cilium absent , abnormal
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 ZFA:0000143 retinal photoreceptor layer retinal photoreceptor layer central region degenerate , abnormal
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 ZFA:0000150 pronephric duct pronephric duct cilium deformed , abnormal
pronephric duct cilium absent , abnormal
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 ZFA:0000151 pronephros pronephros cystic , abnormal
pronephros quality , abnormal
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 ZFA:0000152 retina retina photoreceptor outer segment layer absent , abnormal
retina photoreceptor cell absent , abnormal
retina central region lacks parts or has fewer parts of type photoreceptor cell , abnormal
retina central region lacks parts or has fewer parts of type retinal cone cell , abnormal
retina central region lacks parts or has fewer parts of type retinal rod cell , abnormal
retina central region lacks all parts of type photoreceptor cell , abnormal
Show

 ZFA:0000243 neuromast neuromast cilium absent , abnormal
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 ZFA:0000360 heart tube heart tube mislocalised , abnormal
heart tube bilateral symmetry , abnormal
heart tube position , abnormal
Show

 ZFA:0000529 kidney kidney renal glomerulus cystic , abnormal
kidney cystic , abnormal
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 ZFA:0001058 caudal fin caudal fin curled , abnormal
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 ZFA:0001094 whole organism whole organism shape , abnormal
whole organism curved ventral , abnormal
whole organism dead , abnormal
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 ZFA:0001115 trunk trunk curved ventral , abnormal
trunk curved , abnormal
trunk undulate , abnormal
Show

 ZFA:0001464 retinal outer nuclear layer retinal outer nuclear layer nucleus decreased amount , abnormal
Show

 ZFA:0005242 multi-ciliated epithelial cell multi-ciliated epithelial cell cilium absent , abnormal
Show

 ZFA:0005289 renal duct renal duct increased size , abnormal
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 ZFA:0009127 photoreceptor cell photoreceptor cell abnormal , abnormal
photoreceptor cell lacks all parts of type photoreceptor cell cilium, abnormal
photoreceptor cell cilium assembly disrupted , abnormal
photoreceptor cell decreased amount , abnormal
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 ZFA:0009262 retinal cone cell retinal cone cell decreased distribution , abnormal
retinal cone cell decreased amount , abnormal
Show

 ZFA:0009275 retinal rod cell retinal rod cell decreased distribution , abnormal
retinal rod cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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