ENSDARG00000079620


Danio rerio

Features
Gene ID: ENSDARG00000079620
  
Biological name :amigo1
  
Synonyms : adhesion molecule with Ig-like domain 1 / amigo1
  
Possible biological names infered from orthology : Amphoterin-induced protein 1 / Q80ZD8 / Q86WK6
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 25117390
Gene end: 25120231
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000122948
swissprot - A8BAW4
ZFIN ID - ZDB-GENE-060503-114
Ensembl - ENSDARG00000079620
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AMIGO1ENSG00000181754Homo sapiens
 Amigo1ENSMUSG00000050947Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
amigo3 / adhesion molecule with Ig-like domain 3 / Q86WK7* / Q8C2S7* / Amphoterin-induced protein 3 *ENSDARG0000007446931


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR031283  Amphoterin-induced protein
 IPR031284  Amphoterin-induced protein 1
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007413 axonal fasciculation IEA
 biological_processGO:0007420 brain development IGI
 biological_processGO:0042552 myelination IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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