ENSDARG00000079915


Danio rerio

Features
Gene ID: ENSDARG00000079915
  
Biological name :pot1
  
Synonyms : pot1 / protection of telomeres 1 homolog
  
Possible biological names infered from orthology : Pot1a / Pot1b / protection of telomeres 1 / protection of telomeres 1A / Q91WC1 / Q9NUX5
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 27405738
Gene end: 27492004
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129477
Ensembl peptide - ENSDARP00000145879
Ensembl peptide - ENSDARP00000102969
NCBI entrez gene - 566847     See in Manteia.
RefSeq - XM_005163119
RefSeq - XM_021470509
swissprot - E7F0D5
swissprot - X1WGW8
ZFIN ID - ZDB-GENE-110324-1
Ensembl - ENSDARG00000079915
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POT1ENSGALG00000008740Gallus gallus
 POT1ENSG00000128513Homo sapiens
 Pot1aENSMUSG00000029676Mus musculus
 Pot1bENSMUSG00000024174Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011564  Telomeric single stranded DNA binding POT1/Cdc13
 IPR012340  Nucleic acid-binding, OB-fold
 IPR028389  Protection of telomeres protein 1
 IPR032042  Protection of telomeres protein 1, ssDNA-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000723 telomere maintenance IEA
 biological_processGO:0016233 telomere capping IBA
 biological_processGO:0032210 regulation of telomere maintenance via telomerase IBA
 biological_processGO:0051974 negative regulation of telomerase activity IBA
 cellular_componentGO:0000783 nuclear telomere cap complex IBA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0010521 telomerase inhibitor activity IBA
 molecular_functionGO:0043047 single-stranded telomeric DNA binding IEA
 molecular_functionGO:0098505 G-rich strand telomeric DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr