ENSGALG00000008740


Gallus gallus

Features
Gene ID: ENSGALG00000008740
  
Biological name :POT1
  
Synonyms : POT1 / protection of telomeres protein 1
  
Possible biological names infered from orthology : Pot1a / Pot1b / protection of telomeres 1 / protection of telomeres 1A / Q91WC1 / Q9NUX5
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 21741971
Gene end: 21804718
  
Corresponding Affymetrix probe sets: Gga.11620.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045701
Ensembl peptide - ENSGALP00000030079
NCBI entrez gene - 404538     See in Manteia.
RefSeq - XM_015280913
RefSeq - XM_015280903
RefSeq - XM_015280908
RefSeq - XM_015280911
RefSeq - NM_206992
RefSeq Peptide - NP_996875
swissprot - F1NFN1
swissprot - A0A1D5NZ86
Ensembl - ENSGALG00000008740
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pot1ENSDARG00000079915Danio rerio
 POT1ENSG00000128513Homo sapiens
 Pot1aENSMUSG00000029676Mus musculus
 Pot1bENSMUSG00000024174Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011564  Telomeric single stranded DNA binding POT1/Cdc13
 IPR012340  Nucleic acid-binding, OB-fold
 IPR028389  Protection of telomeres protein 1
 IPR032042  Protection of telomeres protein 1, ssDNA-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000723 telomere maintenance IEA
 biological_processGO:0007004 telomere maintenance via telomerase IEA
 biological_processGO:0016233 telomere capping IEA
 biological_processGO:0032202 telomere assembly IEA
 biological_processGO:0032210 regulation of telomere maintenance via telomerase IEA
 biological_processGO:0032211 negative regulation of telomere maintenance via telomerase IEA
 biological_processGO:0032212 positive regulation of telomere maintenance via telomerase IEA
 biological_processGO:0032508 DNA duplex unwinding IEA
 biological_processGO:0051096 positive regulation of helicase activity IEA
 biological_processGO:0051973 positive regulation of telomerase activity IEA
 biological_processGO:0051974 negative regulation of telomerase activity IEA
 biological_processGO:0060383 positive regulation of DNA strand elongation IEA
 biological_processGO:0061820 telomeric D-loop disassembly IEA
 biological_processGO:0070200 establishment of protein localization to telomere IEA
 biological_processGO:1905774 regulation of DNA helicase activity IEA
 biological_processGO:1905776 positive regulation of DNA helicase activity IEA
 cellular_componentGO:0000781 chromosome, telomeric region IEA
 cellular_componentGO:0000783 nuclear telomere cap complex IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0070187 shelterin complex IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0010521 telomerase inhibitor activity IEA
 molecular_functionGO:0017151 DEAD/H-box RNA helicase binding IEA
 molecular_functionGO:0042162 telomeric DNA binding IEA
 molecular_functionGO:0043047 single-stranded telomeric DNA binding IEA
 molecular_functionGO:0061821 telomeric D-loop binding IEA
 molecular_functionGO:0098505 G-rich strand telomeric DNA binding IEA
 molecular_functionGO:1905773 8-hydroxy-2"-deoxyguanosine DNA binding IEA
 molecular_functionGO:1990955 G-rich single-stranded DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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