ENSDARG00000079946


Danio rerio

Features
Gene ID: ENSDARG00000079946
  
Biological name :sqlea
  
Synonyms : sqlea / squalene epoxidase a
  
Possible biological names infered from orthology : P52019 / Q14534 / SQLE / squalene epoxidase
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 43401005
Gene end: 43413293
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000098511
NCBI entrez gene - 799528     See in Manteia.
RefSeq - NM_001110039
RefSeq Peptide - NP_001103509
swissprot - F1QDN5
ZFIN ID - ZDB-GENE-071004-98
Ensembl - ENSDARG00000079946
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SQLEENSGALG00000036915Gallus gallus
 SQLEENSG00000104549Homo sapiens
 SqleENSMUSG00000022351Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch73-216m24.3ENSDARG0000006331955


Protein motifs (from Interpro)
Interpro ID Name
 IPR013698  Squalene epoxidase
 IPR023753  FAD/NAD(P)-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008203 cholesterol metabolic process IBA
 biological_processGO:0016126 sterol biosynthetic process IBA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004506 squalene monooxygenase activity IBA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IEA


Pathways (from Reactome)
Pathway description
Cholesterol biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr