ENSDARG00000080009


Danio rerio

Features
Gene ID: ENSDARG00000080009
  
Biological name :bahcc1b
  
Synonyms : bahcc1b / BAH domain and coiled-coil containing 1b
  
Possible biological names infered from orthology : BAHCC1 / BAH domain and coiled-coil containing 1 / Mus musculus BAH domain and coiled-coil containing 1 (Bahcc1), transcript variant 2, mRNA. / Q3UHR0
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 34561304
Gene end: 34758474
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127200
Ensembl peptide - ENSDARP00000127238
Ensembl peptide - ENSDARP00000127445
Ensembl peptide - ENSDARP00000147391
Ensembl peptide - ENSDARP00000127236
NCBI entrez gene - 794333     See in Manteia.
RefSeq - XM_009306820
RefSeq - XM_021480385
swissprot - U3JAD4
swissprot - U3JAG8
swissprot - U3JAH0
swissprot - U3JB23
ZFIN ID - ZDB-GENE-100716-2
Ensembl - ENSDARG00000080009
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BAHCC1ENSGALG00000040308Gallus gallus
 BAHCC1ENSG00000266074Homo sapiens
 Bahcc1ENSMUSG00000039741Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
bahcc1a / BAH domain and coiled-coil containing 1a / BAHCC1* / BAH domain and coiled-coil containing 1*ENSDARG0000010373949
tnrc18 / trinucleotide repeat containing 18 / O15417* / trinucleotide repeat-containing 18 protein isoform A *ENSDARG0000007705226


Protein motifs (from Interpro)
Interpro ID Name
 IPR001025  Bromo adjacent homology (BAH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006342 chromatin silencing IBA
 biological_processGO:0031507 heterochromatin assembly IBA
 cellular_componentGO:0000785 chromatin IBA
 cellular_componentGO:0005677 chromatin silencing complex IBA
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003682 chromatin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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