ENSMUSG00000039741


Mus musculus

Features
Gene ID: ENSMUSG00000039741
  
Biological name :Bahcc1
  
Synonyms : Bahcc1 / Mus musculus BAH domain and coiled-coil containing 1 (Bahcc1), transcript variant 2, mRNA. / Q3UHR0
  
Possible biological names infered from orthology : BAH domain and coiled-coil containing 1
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: E2
Gene start: 120232947
Gene end: 120292296
  
Corresponding Affymetrix probe sets: 10383313 (MoGene1.0st)   1460560_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000043643
Ensembl peptide - ENSMUSP00000112784
Ensembl peptide - ENSMUSP00000112827
NCBI entrez gene - 268515     See in Manteia.
MGI - MGI:2679272
RefSeq - XM_017314567
RefSeq - NM_001347621
RefSeq - NM_198423
RefSeq - XM_011249052
RefSeq - XM_011249053
RefSeq - XM_011249054
RefSeq - XM_017314566
RefSeq - XM_006533423
RefSeq - XM_006533426
RefSeq - XM_011249048
RefSeq - XM_011249049
RefSeq - XM_011249050
RefSeq - XM_011249051
RefSeq Peptide - NP_001334550
RefSeq Peptide - NP_940815
swissprot - Q3UHR0
swissprot - E9Q7G4
Ensembl - ENSMUSG00000039741
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bahcc1aENSDARG00000103739Danio rerio
 bahcc1bENSDARG00000080009Danio rerio
 BAHCC1ENSGALG00000040308Gallus gallus
 BAHCC1ENSG00000266074Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tnrc18 / trinucleotide repeat-containing 18 protein isoform A / O15417* / trinucleotide repeat containing 18*ENSMUSG0000003947716


Protein motifs (from Interpro)
Interpro ID Name
 IPR001025  Bromo adjacent homology (BAH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006342 chromatin silencing IBA
 biological_processGO:0031507 heterochromatin assembly IBA
 cellular_componentGO:0000785 chromatin IBA
 cellular_componentGO:0005677 chromatin silencing complex IBA
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003682 chromatin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001402 hypoactivity "reduced movement from one place to another" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, J:64289]
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Allelic Composition: Slc12a5tm1Dlp/Slc12a5+
Genetic Background: involves: C57BL/6J

 MP:0001406 abnormal gait "unusual or distinctive way of walking" [J:65038]
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Allelic Composition: Slc12a5tm1Dlp/Slc12a5+
Genetic Background: involves: C57BL/6J

 MP:0005156 bradykinesia "decreased spontaneity and movement" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:83301]
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Allelic Composition: Slc12a5tm1Dlp/Slc12a5+
Genetic Background: involves: C57BL/6J

 MP:0011090 partial perinatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms within the perinatal period (Mus: E18.5 through postnatal day 1)" [MGI:csmith]
Show

Allelic Composition: Slc12a5tm1Dlp/Slc12a5+
Genetic Background: involves: C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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