ENSDARG00000088276


Danio rerio

Features
Gene ID: ENSDARG00000088276
  
Biological name :si:ch211-190p8.2
  
Synonyms : si:ch211-190p8.2
  
Possible biological names infered from orthology : AC021097.2
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 34069675
Gene end: 34072088
  
Corresponding Affymetrix probe sets: Dr.18405.1.A1_at (Zebrafish Array)   NM_001002724_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000118326
NCBI entrez gene - 436997     See in Manteia.
RefSeq - NM_001002724
RefSeq Peptide - NP_001002724
swissprot - F1QMJ9
ZFIN ID - ZDB-GENE-070424-145
Ensembl - ENSDARG00000088276
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000031804Gallus gallus
 AC021097.2ENSG00000285480Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:171759 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...ENSDARG0000010025980
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...ENSDARG0000010550779
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...ENSDARG0000011193479
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...ENSDARG0000010280679
si:ch211-113a14.22 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / ...ENSDARG0000007028979
hist1h2ba / histone cluster 1, H2ba / H2BFS* / H2BFM* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10...ENSDARG0000010937079
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...ENSDARG0000010541479
FP236812.3 / H2BFM* / H2BFS* / Q7Z2G1* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P0C1H6* / P06899* / O60814* / H2BFWT* / Q99879* / Q99880* / Q99877* / Q93079* ...ENSDARG0000011418079
Q5BJA5 / FP236812.1 / Histone H2B 1/2 / H2BFM* / H2BFS* / P62807* / P58876* / P57053* / Q99877* / P23527* / P0C1H6* / P06899* / O60814* / H2BFWT* / Q99880* / Q99879* / P33778* / Q93079* / ...ENSDARG0000010450179
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...ENSDARG0000010539379
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...ENSDARG0000010548379
Q5BJA5 / CR354435.1 / Histone H2B 1/2 / H2BFM* / H2BFS* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* / P06899* / ...ENSDARG0000007029779
Q5BJA5 / zgc:173587 / H2BFM* / H2BFS* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* / P06899* /...ENSDARG0000007548279
si:ch211-113a14.22 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / ...ENSDARG0000010539779
si:dkey-23a13.22 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0...ENSDARG0000010538479
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...ENSDARG0000009951479
si:ch211-113a14.22 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / ...ENSDARG0000011489579
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...ENSDARG0000010534079
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...ENSDARG0000010458879
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...ENSDARG0000010546879


Protein motifs (from Interpro)
Interpro ID Name
 IPR000558  Histone H2B
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IBA
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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