Manteia

ENSDARG00000102806

Danio rerio

Features

Gene ID:	ENSDARG00000102806

Biological name :	zgc:112234

Synonyms :	zgc:112234

Possible biological names infered from orthology :	1700024P04Rik / H2BFM / H2BFS / H2BFWT / H2B histone family member M / H2B histone family member S / H2B histone family member W, testis specific / HIST1H2BB / HIST1H2BC / HIST1H2BD / HIST1H2BE / HIST1H2BF / HIST1H2BG / HIST1H2BH / HIST1H2BI / HIST1H2BJ / HIST1H2BK / HIST1H2BL / HIST1H2BM / HIST1H2BN / HIST1H2BO / Hist1h2bp / Hist1h2bq / Hist1h2br / Hist2h2bb / HIST2H2BE / HIST2H2BF / Hist3h2ba / HIST3H2BB / histone cluster 1 H2B family member b / histone cluster 1 H2B family member c / histone cluster 1 H2B family member d / histone cluster 1 H2B family member e / histone cluster 1 H2B family member f / histone cluster 1 H2B family member g / histone cluster 1 H2B family member h / histone cluster 1 H2B family member i / histone cluster 1 H2B family member j / histone cluster 1 H2B family member k / histone cluster 1 H2B family member l / histone cluster 1 H2B family member m / histone cluster 1 H2B family member n / histone cluster 1 H2B family member o / histone cluster 2 H2B family member e / histone cluster 2 H2B family member f / histone cluster 3 H2B family member b / Histone H2B type 1-B / Histone H2B type 1-C/E/G / Histone H2B type 1-F/J/L / Histone H2B type 1-H / Histone H2B type 1-K / Histone H2B type 1-M / Histone H2B type 1-P / Histone H2B type 2-B / Histone H2B type 2-E / Histone H2B type 3-A / O60814 / P06899 / P0C1H6 / P10853 / P10854 / P23527 / P33778 / P57053 / P58876 / P62807 / Q16778 / Q5QNW6 / Q64475 / Q64478 / Q64524 / Q64525 / Q6ZWY9 / Q7Z2G1 / Q8CGP1 / Q8CGP2 / Q8N257 / Q93079 / Q99877 / Q99879 / Q99880 / Q9D2U9 / Q9D9Z7 / RIKEN cDNA 1700024P04 gene

Species:	Danio rerio

Chr. number:	7
Strand:	1
Band:
Gene start:	5960491
Gene end:	5961503

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000116739 NCBI entrez gene - 100004810 See in Manteia. NCBI entrez gene - 100333322 See in Manteia. NCBI entrez gene - 100538106 See in Manteia. NCBI entrez gene - 101884412 See in Manteia. NCBI entrez gene - 103911340 See in Manteia. NCBI entrez gene - 326722 See in Manteia. NCBI entrez gene - 554097 See in Manteia. NCBI entrez gene - 564421 See in Manteia. NCBI entrez gene - 564549 See in Manteia. NCBI entrez gene - 100000857 See in Manteia. RefSeq - XM_009302894 RefSeq Peptide - NP_001019569 swissprot - Q05AK8 Ensembl - ENSDARG00000102806

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
H2BFM	ENSG00000101812	Homo sapiens
H2BFS	ENSG00000234289	Homo sapiens
H2BFS	ENSG00000274559	Homo sapiens
H2BFWT	ENSG00000123569	Homo sapiens
O60814	ENSG00000197903	Homo sapiens
P06899	ENSG00000124635	Homo sapiens
P23527	ENSG00000274641	Homo sapiens
P33778	ENSG00000276410	Homo sapiens
P58876	ENSG00000158373	Homo sapiens
P62807	ENSG00000273802	Homo sapiens
P62807	ENSG00000180596	Homo sapiens
P62807	ENSG00000274290	Homo sapiens
P62807	ENSG00000277224	Homo sapiens
P62807	ENSG00000278588	Homo sapiens
Q16778	ENSG00000184678	Homo sapiens
Q5QNW6	ENSG00000203814	Homo sapiens
Q8N257	ENSG00000196890	Homo sapiens
Q93079	ENSG00000275713	Homo sapiens
Q99877	ENSG00000233822	Homo sapiens
Q99879	ENSG00000273703	Homo sapiens
Q99880	ENSG00000185130	Homo sapiens
H2bfm	ENSMUSG00000048155	Mus musculus
P10853	ENSMUSG00000095217	Mus musculus
P10853	ENSMUSG00000069307	Mus musculus
P10853	ENSMUSG00000094338	Mus musculus
P10853	ENSMUSG00000069300	Mus musculus
P10853	ENSMUSG00000069303	Mus musculus
P10853	ENSMUSG00000069268	Mus musculus
P10854	ENSMUSG00000114279	Mus musculus
Q64475	ENSMUSG00000075031	Mus musculus
Q64478	ENSMUSG00000114456	Mus musculus
Q64524	ENSMUSG00000068854	Mus musculus
Q64525	ENSMUSG00000105827	Mus musculus
Q6ZWY9	ENSMUSG00000058385	Mus musculus
Q6ZWY9	ENSMUSG00000047246	Mus musculus
Q6ZWY9	ENSMUSG00000018102	Mus musculus
Q8CGP1	ENSMUSG00000062727	Mus musculus
Q8CGP2	ENSMUSG00000069308	Mus musculus
Q9D2U9	ENSMUSG00000056895	Mus musculus
Q9D9Z7	ENSMUSG00000045022	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...	ENSDARG00000111934	100
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...	ENSDARG00000105414	100
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...	ENSDARG00000105468	100
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...	ENSDARG00000078941	100
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...	ENSDARG00000105340	100
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...	ENSDARG00000104588	100
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...	ENSDARG00000105483	100
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...	ENSDARG00000105393	100
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...	ENSDARG00000105507	100
zgc:112234 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...	ENSDARG00000099514	100
si:dkey-23a13.22 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0...	ENSDARG00000105384	99
si:dkey-261m9.19 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0...	ENSDARG00000114125	99
Q5BJA5 / zgc:173587 / H2BFM* / H2BFS* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* / P06899* /...	ENSDARG00000075482	99
si:ch211-113a14.22 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / ...	ENSDARG00000105397	99
Q5BJA5 / CR354435.1 / Histone H2B 1/2 / H2BFM* / H2BFS* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* / P06899* / ...	ENSDARG00000070297	99
hist1h2ba / histone cluster 1, H2ba / H2BFS* / H2BFM* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10...	ENSDARG00000109370	99
Q5BJA5 / FP236812.1 / Histone H2B 1/2 / H2BFM* / H2BFS* / P62807* / P58876* / P57053* / Q99877* / P23527* / P0C1H6* / P06899* / O60814* / H2BFWT* / Q99880* / Q99879* / P33778* / Q93079* / ...	ENSDARG00000104501	99
FP236812.3 / H2BFM* / H2BFS* / Q7Z2G1* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P0C1H6* / P06899* / O60814* / H2BFWT* / Q99879* / Q99880* / Q99877* / Q93079* ...	ENSDARG00000114180	99
zgc:114046 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / P0C1H6* ...	ENSDARG00000091728	99
si:ch211-113a14.22 / H2BFM* / H2BFS* / Q7Z2G1* / Q6ZWY9* / Q64525* / Q64524* / Q64478* / Q64475* / Q5QNW6* / Q16778* / P62807* / P58876* / P57053* / P33778* / P23527* / P10854* / P10853* / ...	ENSDARG00000070289	99

Protein motifs (from Interpro)

Interpro ID	Name
IPR000558	Histone H2B
IPR007125	Histone H2A/H2B/H3
IPR009072	Histone-fold

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
cellular_component	GO:0000786	nucleosome	IEA
cellular_component	GO:0005634	nucleus	IEA
cellular_component	GO:0005694	chromosome	IEA
molecular_function	GO:0003677	DNA binding	IEA
molecular_function	GO:0046982	protein heterodimerization activity	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

External programs and data are copyrighted by and are the property of their respective authors. The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation
		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr