ENSMUSG00000056895


Mus musculus

Features
Gene ID: ENSMUSG00000056895
  
Biological name :Hist3h2ba
  
Synonyms : Hist3h2ba / Histone H2B type 3-A / Q9D2U9
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B1.3
Gene start: 58948920
Gene end: 58949533
  
Corresponding Affymetrix probe sets: 10376444 (MoGene1.0st)   1449482_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000076397
NCBI entrez gene - 78303     See in Manteia.
MGI - MGI:1925553
RefSeq - NM_030082
RefSeq Peptide - NP_084358
swissprot - Q9D2U9
Ensembl - ENSMUSG00000056895
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR354435.2ENSDARG00000109737Danio rerio
 CU302436.1ENSDARG00000111964Danio rerio
 CU302436.4ENSDARG00000114195Danio rerio
 FP236812.3ENSDARG00000114180Danio rerio
 FP340257.2ENSDARG00000113763Danio rerio
 hist1h2baENSDARG00000109370Danio rerio
 Q5BJA5ENSDARG00000075482Danio rerio
 Q5BJA5ENSDARG00000070297Danio rerio
 Q5BJA5ENSDARG00000104501Danio rerio
 si:ch211-113a14.11ENSDARG00000086591Danio rerio
 si:ch211-113a14.22ENSDARG00000114895Danio rerio
 si:ch211-113a14.22ENSDARG00000070289Danio rerio
 si:ch211-113a14.22ENSDARG00000105397Danio rerio
 si:dkey-108k21.11ENSDARG00000112561Danio rerio
 si:dkey-23a13.22ENSDARG00000105384Danio rerio
 si:dkey-261m9.19ENSDARG00000114125Danio rerio
 si:dkey-261m9.6ENSDARG00000116654Danio rerio
 zgc:112234ENSDARG00000105393Danio rerio
 zgc:112234ENSDARG00000078941Danio rerio
 zgc:112234ENSDARG00000111934Danio rerio
 zgc:112234ENSDARG00000105507Danio rerio
 zgc:112234ENSDARG00000105483Danio rerio
 zgc:112234ENSDARG00000105340Danio rerio
 zgc:112234ENSDARG00000105414Danio rerio
 zgc:112234ENSDARG00000105468Danio rerio
 zgc:112234ENSDARG00000104588Danio rerio
 zgc:112234ENSDARG00000102806Danio rerio
 zgc:112234ENSDARG00000099514Danio rerio
 zgc:114046ENSDARG00000091728Danio rerio
 zgc:171759ENSDARG00000100259Danio rerio
 zgc:171759ENSDARG00000115938Danio rerio
 zgc:173585ENSDARG00000089039Danio rerio
 zgc:194989ENSDARG00000114405Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q64475 / Hist1h2bb / Histone H2B type 1-B / Q99879* / HIST1H2BM* / histone cluster 1 H2B family member m*ENSMUSG0000007503195
P10853 / Hist1h2bl / Histone H2B type 1-F/J/L ENSMUSG0000009433894
P10853 / Hist1h2bn / Histone H2B type 1-F/J/L ENSMUSG0000009521794
P10854 / Hist1h2bm / Histone H2B type 1-M / P58876* / HIST1H2BD* / histone cluster 1 H2B family member d*ENSMUSG0000011427994
P10853 / Hist1h2bj / Histone H2B type 1-F/J/L ENSMUSG0000006930094
P10853 / Hist1h2br / Histone H2B type 1-F/J/L ENSMUSG0000006930394
Q8CGP2 / Hist1h2bp / Histone H2B type 1-P ENSMUSG0000006930894
Q8CGP1 / Hist1h2bk / Histone H2B type 1-K / H2BFS* / O60814* / P57053* / H2B histone family member S* / histone cluster 1 H2B family member k*ENSMUSG0000006272794
P10853 / Hist1h2bq / Histone H2B type 1-F/J/L ENSMUSG0000006930794
Q6ZWY9 / Hist1h2bc / Histone H2B type 1-C/E/G ENSMUSG0000001810294
P10853 / Hist1h2bf / Histone H2B type 1-F/J/L ENSMUSG0000006926894
Q64478 / Hist1h2bh / Histone H2B type 1-H ENSMUSG0000011445694
Q6ZWY9 / Hist1h2be / Histone H2B type 1-C/E/G / P62807* / HIST1H2BC* / histone cluster 1 H2B family member c*ENSMUSG0000004724694
Q6ZWY9 / Hist1h2bg / Histone H2B type 1-C/E/G ENSMUSG0000005838594
Q64524 / Hist2h2be / Histone H2B type 2-E / P06899* / HIST1H2BJ* / histone cluster 1 H2B family member j*ENSMUSG0000006885492
Q64525 / Hist2h2bb / Histone H2B type 2-B / Q5QNW6* / HIST2H2BF* / histone cluster 2 H2B family member f*ENSMUSG0000010582792
P70696 / Hist1h2ba / Histone H2B type 1-A / Q96A08* / histone cluster 1 H2B family member a*ENSMUSG0000005079986
H2bfm / P0C1H6* / H2BFWT* / Q7Z2G1* / H2B histone family member M* / H2B histone family member W, testis specific*ENSMUSG0000004815552
Q9D9Z7 / 1700024P04Rik / RIKEN cDNA 1700024P04 geneENSMUSG0000004502239


Protein motifs (from Interpro)
Interpro ID Name
 IPR000558  Histone H2B
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IBA
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005829 cytosol ISO
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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