ENSDARG00000088619


Danio rerio

Features
Gene ID: ENSDARG00000088619
  
Biological name :rexo4
  
Synonyms : REX4 homolog, 3-5 exonuclease / rexo4
  
Possible biological names infered from orthology : Q6PAQ4 / Q9GZR2 / RNA exonuclease 4
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 5926777
Gene end: 5939521
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000109366
Ensembl peptide - ENSDARP00000150422
NCBI entrez gene - 100333127     See in Manteia.
RefSeq - XM_002665867
swissprot - F1QJP9
ZFIN ID - ZDB-GENE-050411-124
Ensembl - ENSDARG00000088619
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 REXO4ENSGALG00000030609Gallus gallus
 REXO4ENSG00000148300Homo sapiens
 Rexo4ENSMUSG00000052406Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
isg20l2 / interferon stimulated exonuclease gene 20-like 2 / Q9H9L3*ENSDARG0000010226621
isg20 / interferon stimulated exonuclease gene / AEN* / Q8WTP8* / Q9CZI9* / apoptosis enhancing nuclease*ENSDARG0000007978319


Protein motifs (from Interpro)
Interpro ID Name
 IPR012337  Ribonuclease H-like superfamily
 IPR013520  Exonuclease, RNase T/DNA polymerase III
 IPR034920  RNA exonuclease 3/4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008408 3"-5" exonuclease activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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