ENSDARG00000088816


Danio rerio

Features
Gene ID: ENSDARG00000088816
  
Biological name :trabd2b
  
Synonyms : E7F4V6 / trabd2b / TraB domain containing 2B
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 19801865
Gene end: 19904124
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000107884
NCBI entrez gene - 566028     See in Manteia.
RefSeq - XM_005166877
RefSeq Peptide - NP_001257406
swissprot - E7F4V6
ZFIN ID - ZDB-GENE-091204-381
Ensembl - ENSDARG00000088816
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
E7F6V0 / trabd2a / TraB domain containing 2A / Q86V40*ENSDARG0000008970152


Protein motifs (from Interpro)
Interpro ID Name
 IPR002816  Pheromone shutdown, TraB


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0016055 Wnt signaling pathway IEA
 biological_processGO:0030178 negative regulation of Wnt signaling pathway ISS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031301 integral component of organelle membrane ISS
 molecular_functionGO:0004222 metalloendopeptidase activity ISS
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0017147 Wnt-protein binding ISS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr