ENSDARG00000089701


Danio rerio

Features
Gene ID: ENSDARG00000089701
  
Biological name :trabd2a
  
Synonyms : E7F6V0 / trabd2a / TraB domain containing 2A
  
Possible biological names infered from orthology : Q86V40
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 250078
Gene end: 299454
  
Corresponding Affymetrix probe sets: Dr.21657.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000108636
NCBI entrez gene - 564021     See in Manteia.
RefSeq - NM_001302230
RefSeq Peptide - NP_001289159
swissprot - K7DY03
swissprot - E7F6V0
ZFIN ID - ZDB-GENE-030131-4053
Ensembl - ENSDARG00000089701
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000026395Gallus gallus
 Q86V40ENSG00000186854Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
E7F4V6 / trabd2b / TraB domain containing 2BENSDARG0000008881655


Protein motifs (from Interpro)
Interpro ID Name
 IPR002816  Pheromone shutdown, TraB


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0016055 Wnt signaling pathway IEA
 biological_processGO:0030178 negative regulation of Wnt signaling pathway ISS
 biological_processGO:0060322 head development ISS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031301 integral component of organelle membrane ISS
 molecular_functionGO:0004222 metalloendopeptidase activity ISS
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0017147 Wnt-protein binding ISS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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