ENSDARG00000089076


Danio rerio

Features
Gene ID: ENSDARG00000089076
  
Biological name :gphna
  
Synonyms : gephyrin a / gphna
  
Possible biological names infered from orthology : gephyrin / GPHN / Q8BUV3 / Q9NQX3
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 33999630
Gene end: 34185513
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129869
Ensembl peptide - ENSDARP00000156343
Ensembl peptide - ENSDARP00000154364
Ensembl peptide - ENSDARP00000145810
Ensembl peptide - ENSDARP00000139591
Ensembl peptide - ENSDARP00000135843
Ensembl peptide - ENSDARP00000112511
Ensembl peptide - ENSDARP00000128351
NCBI entrez gene - 555470     See in Manteia.
RefSeq - XM_017351649
RefSeq - XM_017351651
swissprot - D3KYK8
swissprot - D3KYK7
swissprot - A0A0R4INA6
swissprot - D3KYL0
swissprot - D3KYK9
ZFIN ID - ZDB-GENE-110127-3
Ensembl - ENSDARG00000089076
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GPHNENSGALG00000009587Gallus gallus
 GPHNENSG00000171723Homo sapiens
 GphnENSMUSG00000047454Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gphnb / gephyrin b / GPHN* / Q8BUV3* / Q9NQX3* / gephyrin*ENSDARG0000010085187


Protein motifs (from Interpro)
Interpro ID Name
 IPR001453  MoaB/Mog domain
 IPR005110  MoeA, N-terminal and linker domain
 IPR005111  MoeA, C-terminal, domain IV
 IPR008284  Molybdenum cofactor biosynthesis, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006777 Mo-molybdopterin cofactor biosynthetic process IEA
 biological_processGO:0032324 molybdopterin cofactor biosynthetic process IEA
 biological_processGO:0072579 glycine receptor clustering IGI
 cellular_componentGO:0005886 plasma membrane IEA


Pathways (from Reactome)
Pathway description
Molybdenum cofactor biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000075 spinal cord spinal cord glycine-gated chloride channel complex unlocalised , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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