ENSDARG00000100851


Danio rerio

Features
Gene ID: ENSDARG00000100851
  
Biological name :gphnb
  
Synonyms : gephyrin b / gphnb
  
Possible biological names infered from orthology : gephyrin / GPHN / Q8BUV3 / Q9NQX3
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 50852356
Gene end: 50999404
  
Corresponding Affymetrix probe sets: Dr.6487.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000134783
Ensembl peptide - ENSDARP00000138940
Ensembl peptide - ENSDARP00000135251
NCBI entrez gene - 100007749     See in Manteia.
RefSeq - NM_001172400
RefSeq - XM_021468343
RefSeq Peptide - NP_001165871
swissprot - A0A0R4IL13
swissprot - A0A0G2KS66
swissprot - D3KYL1
swissprot - D3KYL2
swissprot - A0A0R4IST7
ZFIN ID - ZDB-GENE-070705-4
Ensembl - ENSDARG00000100851
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GPHNENSGALG00000009587Gallus gallus
 GPHNENSG00000171723Homo sapiens
 GphnENSMUSG00000047454Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gphna / gephyrin a / GPHN* / Q9NQX3* / gephyrin*ENSDARG0000008907694


Protein motifs (from Interpro)
Interpro ID Name
 IPR001453  MoaB/Mog domain
 IPR005110  MoeA, N-terminal and linker domain
 IPR005111  MoeA, C-terminal, domain IV
 IPR008284  Molybdenum cofactor biosynthesis, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006777 Mo-molybdopterin cofactor biosynthetic process IEA
 biological_processGO:0018315 molybdenum incorporation into molybdenum-molybdopterin complex IBA
 biological_processGO:0032324 molybdopterin cofactor biosynthetic process IEA
 biological_processGO:0072579 glycine receptor clustering IGI
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005886 plasma membrane IEA
 molecular_functionGO:0061598 molybdopterin adenylyltransferase activity IBA
 molecular_functionGO:0061599 molybdopterin molybdotransferase activity IBA


Pathways (from Reactome)
Pathway description
Molybdenum cofactor biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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