ENSDARG00000089101


Danio rerio

Features
Gene ID: ENSDARG00000089101
  
Biological name :plrdgb
  
Synonyms : PITP-less RdgB-like protein / plrdgb
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 39705483
Gene end: 39897711
  
Corresponding Affymetrix probe sets: Dr.8230.1.S1_at (Zebrafish Array)   NM_131575_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000122783
Ensembl peptide - ENSDARP00000135456
NCBI entrez gene - 58096     See in Manteia.
RefSeq - NM_131575
RefSeq Peptide - NP_571650
swissprot - F1QSC0
swissprot - A0A0R4ILR6
ZFIN ID - ZDB-GENE-000406-3
Ensembl - ENSDARG00000089101
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pitpnm3 / PITPNM family member 3ENSDARG0000005525568
PITPNC1 / phosphatidylinositol transfer protein, cytoplasmic 1 / Q9UKF7*ENSDARG000000992602
zgc:101640ENSDARG000000228071
pitpnbl / phosphatidylinositol transfer protein, beta, likeENSDARG000000153101
pitpnaa / phosphatidylinositol transfer protein, alpha a / PITPNA* / P53810* / Q00169* / phosphatidylinositol transfer protein alpha*ENSDARG000000394901
pitpnab / phosphatidylinositol transfer protein, alpha b / PITPNA* / P53810* / Q00169* / phosphatidylinositol transfer protein alpha*ENSDARG000000440911
pitpnb / phosphatidylinositol transfer protein, beta / P48739*ENSDARG000000360051


Protein motifs (from Interpro)
Interpro ID Name
 IPR001666  Phosphatidylinositol transfer protein
 IPR004177  DDHD domain
 IPR023214  HAD superfamily
 IPR031315  LNS2/PITP


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr