ENSDARG00000036005


Danio rerio

Features
Gene ID: ENSDARG00000036005
  
Biological name :pitpnb
  
Synonyms : phosphatidylinositol transfer protein, beta / pitpnb
  
Possible biological names infered from orthology : P48739 / P53811
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 4046448
Gene end: 4085216
  
Corresponding Affymetrix probe sets: Dr.11829.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000052267
Ensembl peptide - ENSDARP00000111558
NCBI entrez gene - 393894     See in Manteia.
swissprot - E7EZR3
swissprot - F1QRW4
ZFIN ID - ZDB-GENE-040426-895
Ensembl - ENSDARG00000036005
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PITPNBENSGALG00000005654Gallus gallus
 P48739ENSG00000180957Homo sapiens
 P53811ENSMUSG00000050017Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pitpnbl / phosphatidylinositol transfer protein, beta, likeENSDARG0000001531077
pitpnaa / phosphatidylinositol transfer protein, alpha a / PITPNA* / P53810* / Q00169* / phosphatidylinositol transfer protein alpha*ENSDARG0000003949074
pitpnab / phosphatidylinositol transfer protein, alpha b / PITPNA* / P53810* / Q00169* / phosphatidylinositol transfer protein alpha*ENSDARG0000004409173
zgc:101640ENSDARG0000002280733
PITPNC1 / phosphatidylinositol transfer protein, cytoplasmic 1 / Q9UKF7*ENSDARG0000009926026
pitpnm3 / PITPNM family member 3ENSDARG000000552553
plrdgb / PITP-less RdgB-like proteinENSDARG000000891013


Protein motifs (from Interpro)
Interpro ID Name
 IPR001666  Phosphatidylinositol transfer protein
 IPR023393  START-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015914 phospholipid transport IEA
 biological_processGO:0035845 photoreceptor cell outer segment organization IMP
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005802 trans-Golgi network IDA
 molecular_functionGO:0005548 phospholipid transporter activity IEA
 molecular_functionGO:0008525 phosphatidylcholine transporter activity IDA
 molecular_functionGO:0008526 phosphatidylinositol transporter activity IDA


Pathways (from Reactome)
Pathway description
PI and PC transport between ER and Golgi membranes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000144 retinal pigmented epithelium retinal pigmented epithelium distance retinal outer nuclear layer , abnormal
Show

 ZFA:0001464 retinal outer nuclear layer retinal outer nuclear layer disorganized , abnormal
Show

 ZFA:0009262 retinal cone cell retinal cone cell photoreceptor outer segment decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr