ENSDARG00000089917


Danio rerio

Features
Gene ID: ENSDARG00000089917
  
Biological name :sh3tc2
  
Synonyms : SH3 domain and tetratricopeptide repeats 2 / sh3tc2
  
Possible biological names infered from orthology : Q80VA5 / Q8TF17 / SH3 domain and tetratricopeptide repeat-containing protein 2
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 34780886
Gene end: 34798825
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000106783
Ensembl peptide - ENSDARP00000151523
Ensembl peptide - ENSDARP00000142301
Ensembl peptide - ENSDARP00000142085
Ensembl peptide - ENSDARP00000142071
Ensembl peptide - ENSDARP00000132107
NCBI entrez gene - 100535152     See in Manteia.
RefSeq - XM_002664431
swissprot - A0A140LGC2
swissprot - A0A140LFR1
swissprot - E9QI21
swissprot - A0A0R4IDG8
swissprot - A0A140LFP8
ZFIN ID - ZDB-GENE-081104-347
Ensembl - ENSDARG00000089917
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000043688Gallus gallus
 ENSGALG00000044576Gallus gallus
 Q8TF17ENSG00000169247Homo sapiens
 Q80VA5ENSMUSG00000045629Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SH3TC1 / SH3 domain and tetratricopeptide repeats 1 / Q8TE82*ENSDARG0000007733024


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr