ENSDARG00000090309


Danio rerio

Features
Gene ID: ENSDARG00000090309
  
Biological name :ubxn1
  
Synonyms : UBX domain protein 1 / ubxn1
  
Possible biological names infered from orthology : Q04323 / Q922Y1
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 45471642
Gene end: 45482605
  
Corresponding Affymetrix probe sets: Dr.23733.1.S1_at (Zebrafish Array)   Dr.23733.2.A1_at (Zebrafish Array)   NM_212607_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000108064
Ensembl peptide - ENSDARP00000142432
Ensembl peptide - ENSDARP00000142132
NCBI entrez gene - 322073     See in Manteia.
RefSeq - NM_212607
RefSeq Peptide - NP_997772
swissprot - A0A140LGQ3
swissprot - A0A140LFV6
swissprot - F1QTX4
ZFIN ID - ZDB-GENE-030131-792
Ensembl - ENSDARG00000090309
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UBXN1ENSG00000162191Homo sapiens
 Ubxn1ENSMUSG00000071655Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ubxn4 / UBX domain protein 4ENSDARG000001005975


Protein motifs (from Interpro)
Interpro ID Name
 IPR001012  UBX domain
 IPR009060  UBA-like superfamily
 IPR015940  Ubiquitin-associated domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
N-glycan trimming in the ER and Calnexin/Calreticulin cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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